Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zymoseptoria_20brevis_20[genbank_20GCA_5F000966595.1_202015-03-31] 6,070 sequences; 31,914,300 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq339 131 2e-25 seq5787 105 7e-18 seq360 89.7 5e-13 >seq339 Length=67822 Score = 131 bits (144), Expect = 2e-25 Identities = 571/892 (64%), Gaps = 25/892 (3%) Strand=Plus/Plus Query 7525 TACTTGTTGAAAATCAACGGCGAATGCGCGGAACGAATTCAACACATGCTGTTGCGCGTG 7584 ||| | |||| ||||||||| | || || || ||||| ||| | |||| ||| Sbjct 50614 TACCTTTTGAGGATCAACGGCAAGGTTGCCGAGAGACCACAACAGATGATCATGCGTGTG 50673 Query 7585 GCGGTGGGCATTCACGGCGAAGACATTGACGCCGCCTTGGAAACGTACCAAATGATGTCT 7644 || || ||||| |||||||| ||||| || ||||| | || || ||| | ||||| Sbjct 50674 GCCGTCGGCATCCACGGCGAGGACATCGAGTCCGCCATTGAGACCTACAACTACATGTCG 50733 Query 7645 TTGAAACAGTTTACGCACGCTTCGCCCACCATGTTTGCCGCGGGCACA---AACGCGCCT 7701 || | || || || || ||||| || |||| ||| || ||| ||||| | Sbjct 50734 AACAAGTACTTCACACATGCGTCGCCTACGCTGTTCAGCGCTGGAACACCCAACGC---T 50790 Query 7702 CAATTGTCCTCGTGTTTTTTGCTAACCATGCGCGAAGACAGCATCGACGGCATTTACAAC 7761 ||| || | || || || | | |||| || |||||||| || || || ||| || Sbjct 50791 CAACTGGCATCCTGCTTCCTCATCGACATGAAAGATGACAGCATTGATGGGATCTACGAC 50850 Query 7762 ACGCTGCGCGATTGCGCCAATATTTCCAAATACGGCGGCGGAATAGGTCTGAACGTAAAC 7821 || | ||||||| || ||||| ||| ||| || || || || ||||| || Sbjct 50851 ACATTAAAGACCTGCGCCATGATCTCCAAGAACGCCGGAGGCATTGGGCTCAACGTCCAC 50910 Query 7822 GACGTGCGCGCCAACGGTAGCCG-CATCGTGTCCACCAACGGAAAAGCCAGCGGTTTAGA 7880 | ||||| | ||| ||| |||| ||||||||||| | ||| |||| | | Sbjct 50911 AGAATTCGCGCAACCGG-AGCATACATCAGCGGCACCAACGGAACATCCAACGGTCTCGT 50969 Query 7881 GCCCATGTTGCGCGTGTTCAATAACGCGGTGCGACATGTAGACCAGGGGGG---AAAGCG 7937 |||||| |||| ||||| || ||| | | || | || |||||||| || ||||| Sbjct 50970 ACCCATGCTGCGTGTGTTTAACAACACCGCTCGCTACGTCGACCAGGGCGGCAACAAGCG 51029 Query 7938 CAAAGGCGCCGCTGCCATCTATTTGGAGCCGTGGCACGCGGACATTTACGCAGTGCTAAA 7997 || || |||||| || | ||||| |||||||| || | | | | | | | Sbjct 51030 ACCTGGTGCTTTTGCCATGTACATCGAGCCATGGCACGCAGATGTCTTCTCCTTCTTGGA 51089 Query 7998 TCTGCGTCGCAACATGGGTTGCGAAGACAGCAAAGCGCGCGATCTATTCTTCGGATTGTG 8057 ||| || ||| || || || || |||||||| |||| ||| |||| Sbjct 51090 TCTCCGCAAGAACCACGGAAAGGAGGAGGTTCGTGCTCGCGATCTGTTCTACGGTCTGTG 51149 Query 8058 GGTGCCCGATCTGTTTATGAGGCGCGTTCATTTCGACGCACAA--TGGTCGCTCATGTGC 8115 ||| || ||||| || |||| ||| ||| | | | || | ||| | | |||||| Sbjct 51150 GGTCCCAGATCTCTTCATGAAGCGTGTTGA--GCAAAATACCACCTGGACTTTGATGTGC 51207 Query 8116 CCCGATCGTTGCCCTTTATTAAAAAACGTTTACGGTTCAAAATTTGAACAATTGTACAAA 8175 || | ||||| | | || ||||| | | || || | ||||| | Sbjct 51208 CCTCACGAGTGCCCCGGTCTGGCTGATGTCTACGGCGCTGAGTTCGAGGAGCTGTACGAG 51267 Query 8176 CAATACGAACACGACGGC--GCGTACGTGCGGCAAGTGAAAGCGCGCGACCTGCACCG-- 8231 | |||||| | || ||| | || |||| | | | |||| | | || | | Sbjct 51268 CGATACGAGCGTGAGGGCAAGGGT-CGTGAG---ACCGTCCGCGCTC-AGAAGCTCTGGT 51322 Query 8232 -CGCCATTATCGAATGTCAAAACGAAACCGGTATGCCGTACATGCTGTACAAAGACGCTT 8290 ||||| |||| ||||| ||| ||||||| || ||||| || ||||| |||||| Sbjct 51323 ATGCCATCCTCGAGGCTCAAACCGAGACCGGTACCCCATACATCCTCTACAAGGACGCTG 51382 Query 8291 GCAACGCCAAAAGCAATCAAAGCAACGTGGGCACCATTTGTTGCAGCAATCTGTGCGCTG 8350 |||| ||| ||||| || | ||| |||| ||||| | || |||||| ||| | | Sbjct 51383 CCAACAGCAAGAGCAACCAGAAGAACTTGGGAACCATCCGCAGCTCCAATCTCTGCACCG 51442 Query 8351 AAATTGTACAGTACAGCGCGCCCGACGAAGTGGCCGTTTGCAATCTAGCGTC 8402 | ||| | |||||| || || ||||| || ||||| ||||| || || || Sbjct 51443 AGATTATCGAGTACACTGCTCCTGACGAGGTCGCCGTGTGCAACCTTGCATC 51494 >seq5787 Length=111344 Score = 105 bits (116), Expect = 7e-18 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 134483 CTTTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC 134542 || |||||| | || || | ||| | ||| || ||| ||||| ||||||||||| || Sbjct 91192 CTGTCCTCCACGCAGACGGAGCACCAAGTGCAGGGTGCTCTCCTTCTGAATGTTGTAATC 91133 Query 134543 GCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGG 134602 || || | ||| || ||||| ||||| || || || | ||||| ||||| || Sbjct 91132 AGAAAGTGTCCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATGAGGCGCTGTTGATCCGG 91073 Query 134603 CGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTC 134662 || || || || || |||||||| || || || ||| | |||||| || || || Sbjct 91072 TGGGATACCCTCCTTGTCTTGAATCTTCGACTTCACGTTGTCGATTGTGTCTGATGACTC 91013 Query 134663 CACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||| ||||| || || || || ||||| | || || ||||| |||||||| Sbjct 91012 CACTTCGAGTGTGATAGTCTTGCCGGTGAGTGTCTTGACGAAGATTTGCAT 90962 Score = 98.7 bits (108), Expect = 1e-15 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 ||||| || ||||| || ||||| || ||||||||||| | ||| | ||| ||| Sbjct 90942 ACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGGCCGTCCTCG 90883 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 || || ||||| || || ||||| ||||| || || || || ||||| || || || || Sbjct 90882 AGTTGCTTGCCGGCGAAGATCAATCGCTGTTGGTCTGGGGGAATGCCCTCCTTGTCCTGG 90823 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || || ||||| ||| | ||||| || || ||||| || | || || || || Sbjct 90822 ATCTTAGACTTGACGTTGTCGATGGTGTCCGAAGACTCCACCTCCAAGGTGATCGTCTTG 90763 Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || | ||| || ||||| || ||||| Sbjct 90762 CCAGTGAGAGTCTTGACGAAGATCTGCAT 90734 Score = 91.5 bits (100), Expect = 1e-13 Identities = 106/143 (74%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| |||| ||| | ||| || ||||| ||||| |||||||||||||||| Sbjct 90732 CCACCACGGAGGCGCAGCACCAAGTGGAGAGTGGACTCCTTCTGAATGTTGTAGTCGCTG 90673 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| | || || ||||| || || || || || | ||||||||| || || || Sbjct 90672 AGGGTGCGCCCATCCTCAAGCTGCTTTCCCGCGAAGATGAGACGCTGCTGGTCTGGAGGA 90613 Query 134607 ATGCCTTCTTTTTCTTGAATTTT 134629 ||||| || || ||||| || || Sbjct 90612 ATGCCCTCCTTGTCTTGGATCTT 90590 >seq360 Length=110533 Score = 89.7 bits (98), Expect = 5e-13 Identities = 131/183 (72%), Gaps = 2/183 (1%) Strand=Plus/Plus Query 134524 CCTTTTGAATGTTGTAGTCGC-CAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAA 134582 |||| || ||||||||||||| ||| | | | | || ||||| || || || || || Sbjct 36743 CCTTCTGGATGTTGTAGTCGCTCAAAGTTCGGCCA-TCCTCGAGTTGCTTTCCGGCGAAG 36801 Query 134583 ATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCG 134642 ||||| ||||| || || || || || || || || || ||||| || ||||| | Sbjct 36802 ATCAATCGCTGTTGGTCCGGTGGGATTCCCTCCTTATCCTGAATCTTGCTCTTGACGTTG 36861 Query 134643 TCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACG 134702 || | ||||||||||| ||||| ||||| || || || || || || | || || ||| Sbjct 36862 TCGATGGTGTCGGACGACTCCACCTCGAGGGTGATAGTCTTGCCCGTGAGGGTCTTCACG 36921 Query 134703 AAA 134705 ||| Sbjct 36922 AAA 36924 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505360052896400