Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zymoseptoria_20brevis_20[genbank_20GCA_5F000966595.1_202015-03-31] 6,070 sequences; 31,914,300 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq339 205 1e-47 seq407 113 5e-20 >seq339 Length=67822 Score = 205 bits (226), Expect = 1e-47 Identities = 1133/1780 (64%), Gaps = 51/1780 (3%) Strand=Plus/Plus Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281 ||||| | ||| ||||||| |||||| |||| || || || || ||||| || || | | Sbjct 50650 CCACAACAGATGATCATGCGTGTGGCCGTCGGCATCCACGGCGAGGACATCGAGTCCGCC 50709 Query 104282 TTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTT 104340 | ||||| ||| || | ||||| | | ||| |||| || || | || || || || Sbjct 50710 ATTGAGACCTACAACTACATGTCGAACAAGTAC-TTCACACATGCGTCGCCTACGCTGTT 50768 Query 104341 CAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 104400 || ||||| ||||| | | ||| || | |||||||| |||| || || || || Sbjct 50769 CAGCGCTGGAACACCCAACGCTCAACTGGCATCCTGCTTCCTCATCGACATGAAAGATGA 50828 Query 104401 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAA--ATCTCAAAGTGGGCT 104458 | || | || ||||| | || ||| || ||||| | ||||| ||| || Sbjct 50829 CAGCATTGATGGGATCTACGACACA-TTAAAGACC-TGCGCCATGATCTCCAAGAACGCC 50886 Query 104459 GGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACA 104518 || || |||||| | || |||| | | || | | | || | || || Sbjct 50887 GGAGGCATTGGGCTCAACGTCCACAGAATTCGCGCAACCGGAGCATACATCAGCGGCACC 50946 Query 104519 AATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 104578 || || ||| | ||| | | || ||||| || || |||||| ||| || ||||| Sbjct 50947 AACGGAACATCCAACGGTCTCGTACCCATGCTGCGTGTGTTTAACAACACCGCTCGCTAC 51006 Query 104579 GTAAATCAAGCTGGGCGTCGA-AAGGGATCTA------TCGCAGTCTATCTTGAGCCATG 104631 || | || ||||| | | ||| || || | || | || | |||||||| Sbjct 51007 GTCGACCA----GGGCGGCAACAAGCGACCTGGTGCTTTTGCCATGTACATCGAGCCATG 51062 Query 104632 GCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCG 104691 |||||| ||| || | ||| | || | || ||||| || | ||||||| || Sbjct 51063 GCACGCAGATGTCTTCTCCTTCTTGGATCTCCGCAAGAACCACGGAAAGGAGGAGGTTCG 51122 Query 104692 GTGC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGG 104750 ||| |||||||| |||| || ||| ||| | |||||||||||||||||| | |||||| Sbjct 51123 -TGCTCGCGATCTGTTCTACGGTCTGTGGGTCCCAGATCTCTTCATGAAGCGTGTTGAGC 51181 Query 104751 AGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGG 104810 | | | || ||| || | | || || || || || ||||| | |||| | | Sbjct 51182 AAAATACCACCTGGACTTTGATGTGCCCTCACGAGTGCCCCGGTCTGGCTGATGTCTACG 51241 Query 104811 GTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACGG 104870 | | ||||| || | || ||| |||||| || || || || ||| | Sbjct 51242 GCGCTGAGTTCGAGGAGCTGTACGAGCGATACGAGCGTGAGGGCAAGGGTCGTGAGACCG 51301 Query 104871 TGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCA 104929 | | ||| | || | | ||| | || || ||| || ||||||||||||| ||||| ||| Sbjct 51302 TCCGCGCT-CAGAAGCTCTGGTATGCCATCCTCGAGGCTCAAACCGAGACCGGTACCCCA 51360 Query 104930 TACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATC 104989 ||||| || ||||| ||||| ||| ||||| || || ||||| ||||| ||| Sbjct 51361 TACATCCTCTACAAGGACGCTGCCAACAGCAAGAGCAACCAGAAGAACTTGGGAACCATC 51420 Query 104990 AAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTG 105049 || ||||||||||| || || || | || | || | || ||| || ||| Sbjct 51421 CGCAGCTCCAATCTCTGCACCGAGATTATCGAGTACACTGCTCCTGACGAGGTCGCCGTG 51480 Query 105050 TGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGA-CATTT-G 105107 || ||||| ||||| |||| || |||| || || || || || || || | ||| | Sbjct 51481 TGCAACCTTGCATCTCTCGCCCTGCCCACATACGTCGA--CATTGAGAACGAGCGTTTCG 51538 Query 105108 ATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTG 105167 | | || || |||||| | || || | || |||||||| ||| | |||| | || | Sbjct 51539 ACTTCGAGAAGCTCCACCAGGTCACCCAGACCGTCACCAAGAACTTGAACAAGATCATCG 51598 Query 105168 ATAGAAATTTTTACCCCGT-TGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATT 105226 | || |||||||| ||| ||||| || || | | |||||||| || Sbjct 51599 AGGTCAACCACTACCCCGTGCCAGA-AGCTCGCAAGAGCAACTTCCGTCACCGTCCCATC 51657 Query 105227 GGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCAT-TCTTTGTCGCCACGCATTTGATTC 105285 ||||| ||||| | ||||| || |||| ||| | || || ||| | ||||| || Sbjct 51658 GGTCTTGGTGTCAACGGTCTTGCTGATGCTTTCTTGGCTCTG-CGCATGCCTTTTGACTC 51716 Query 105286 CGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCT--- 105342 || || | |||| | || || |||||||| || ||||| ||||| Sbjct 51717 TCCTGAGGCTCGCCAGCTCAACATCCAGATCTTCGAGACCATCTACCACGCTGCTCTCAC 51776 Query 105343 ----TGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTT 105398 | | |||| || | || || || | ||| ||||| || || | ||||| | Sbjct 51777 CGCCTCATGCGATCTC---GCTGCCA-AGCT---TGGACCATACGAGACATACGAGGGGT 51829 Query 105399 CTCCAGCTTCACAAGGG-GTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCT--TC 105455 | || | || |||||| | ||| |||| || ||||||| |||| || | || || Sbjct 51830 CCCCCGTCTC-CAAGGGCGAGCTCCAATACGACATGTGGG-GTGTGACTCCTA-CTGATC 51886 Query 105456 ACTACGACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCC 105515 || ||||||| || ||||||| ||| ||| | ||| | || ||| |||| Sbjct 51887 TCTGGGACTGGGCCGCACTCAAGGCCAAGATCGCCGAGCATGGTGTCCGCAACTCGCTCC 51946 Query 105516 TCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTG 105575 || | ||||| |||||||| || |||||| | || ||| |||| || || || || | Sbjct 51947 TCGTCGCTCCCATGCCAACTGCGTCCACCTCGCAGATCATGGGCTTCAACGAGTGTTTCG 52006 Query 105576 AACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCA 105635 | || ||||| | |||||||| | | ||||| || ||||| | |||||| Sbjct 52007 AGCCATACACCAGCAACATCTACTCCCGTCGTGTGCTCGCTGGTGAGTTCCAGGTTGTCA 52066 Query 105636 ACAAGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGATC 105695 || | | || | ||| | ||| ||| |||||||| | | |||||| | | Sbjct 52067 ACCCGTGGTTGCTGAAGGACTTGGTCGAGCGTGGCCTCTGGTCAGACAACATGAAGAACC 52126 Query 105696 TCATGGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAAATGAAATTAAGA 105755 ||| | | ||||||||||| || ||| | || || |||| | ||| Sbjct 52127 GCATCATCGCCGATGGTGGTTCCATCCAGCGCATTCCAAACATCCCCGATGACCTCAAGG 52186 Query 105756 AGTTGTACCGCACAGTTTGGGAAATCAAGATGAAGGATGTCATTGACATGGCCGCAGATC 105815 ||||| || || ||||| |||| | | || || | ||| |||| || | Sbjct 52187 CTCTGTACAAGACCGTCTGGGAGATCAGCCAGCGCCACATCGTTCAGATGTCCGCTGACC 52246 Query 105816 GTGGTCGCTTCATTGATCAAAGTCAAAGTATGAATCTCTTCATGGAAAGTCCAACGATGT 105875 ||||| ||||| ||||| ||| || |||| || |||| | || || ||| Sbjct 52247 GTGGTGCTTTCATCGATCAGTCTCAGAGCCTGAACATCCACATGAAGGAGCCCACCATGG 52306 Query 105876 CCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGGATGTATT 105935 ||| || | |||||| | | | |||||| || || || || || ||||| | Sbjct 52307 GCAAAATCACCAGCATGCACTTCGCCGGCTGGAAGCTCGGCCTGAAGACTGGCATGTACT 52366 Query 105936 ACCTCCGATCTAAGGCAAAGGC-GCGCCCAATTCAGTTCA 105974 |||| || | | ||| | | |||||| |||||||||| Sbjct 52367 ACCTTCGCACCATGGCGGCGTCTGCGCCC-ATTCAGTTCA 52405 >seq407 Length=91491 Score = 113 bits (124), Expect = 5e-20 Identities = 121/160 (76%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 94796 CCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCT 94855 ||||||| || ||| |||| ||||| ||||||||||||||||||| || || | Sbjct 18682 CCTTTGCCTGCCGTCTCATCGCCTTTGCCGCCATTGAGGGTATCTTCTTCTCCGGATCTT 18741 Query 94856 TCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACG 94915 || | || | ||| | |||||||| ||||||||||| || ||| ||||||||||| Sbjct 18742 TCGCATCGATCTTCTGGTTGAAGAAGCGTGGTCTCATGCCCGGCCTCACCTTCTCCAACG 18801 Query 94916 AGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 94955 |||| ||||| ||||||||||| | ||| || ||||| Sbjct 18802 AGCTCATCTCCCGTGACGAGGGCATGCACACCGACTTTGC 18841 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583216545086800