Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zymoseptoria_20brevis_20[genbank_20GCA_5F000966595.1_202015-03-31] 6,070 sequences; 31,914,300 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq5787 89.7 3e-13 seq360 82.4 5e-11 >seq5787 Length=111344 Score = 89.7 bits (98), Expect = 3e-13 Identities = 159/230 (69%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || ||||| || || ||||| || || || ||||| |||||||| || || | Sbjct 90962 ATGCAAATCTTCGTCAAGACACTCACCGGCAAGACTATCACACTCGAAGTGGAGTCATCA 91021 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| | || | | || || ||| ||||| || ||| | || || |||||| Sbjct 91022 GACACAATCGACAACGTGAAGTCGAAGATTCAAGACAAGGAGGGTATCCCACCGGATCAA 91081 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACG--CACTTTAGGCGATTACA 23788 ||||| | || || |||||||| || || || |||| || |||||| ||||||| Sbjct 91082 CAGCGCCTCATCTTCGCCGGCAAGCAGCTTGAGGACGGCCGGACACTTT--CTGATTACA 91139 Query 23789 ACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGA 23838 |||| || || ||| ||| | || || || | | |||| |||||| Sbjct 91140 ACATTCAGAAGGAGAGCACCCTGCACTTGGTGCTCCGTCTGCGTGGAGGA 91189 >seq360 Length=110533 Score = 82.4 bits (90), Expect = 5e-11 Identities = 126/180 (70%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 23619 TTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACGGACACTGT 23678 |||||| || ||||||||||| || || ||||| ||||| || || || | ||||| | Sbjct 36924 TTTCGTGAAGACCCTCACGGGCAAGACTATCACCCTCGAGGTGGAGTCGTCCGACACCAT 36865 Query 23679 TGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAACAGCGTTT 23738 || | | || || ||| || || || || | || || || |||||||| || Sbjct 36864 CGACAACGTCAAGAGCAAGATTCAGGATAAGGAGGGAATCCCACCGGACCAACAGCGATT 36805 Query 23739 AATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAACATACAAAA 23798 || || ||||| || ||||| || || | || ||||| |||| |||||||| || || Sbjct 36804 GATCTTCGCCGGAAAGCAACTCGAGGATGGCCGAACTTTGAGCGACTACAACATCCAGAA 36745 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 337984594683560