Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zymoseptoria_20brevis_20[genbank_20GCA_5F000966595.1_202015-03-31] 6,070 sequences; 31,914,300 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq360 114 3e-20 seq5787 100 7e-16 >seq360 Length=110533 Score = 114 bits (126), Expect = 3e-20 Identities = 135/181 (75%), Gaps = 4/181 (2%) Strand=Plus/Plus Query 151917 TTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAG--GCTTTTCCCGGCGAAGA 151974 || ||||||||||| ||| ||||||| ||||| || || ||||| |||||||||| Sbjct 36745 TTCTGGATGTTGTAGTCGCTCAAAGTTCGGCCATCCTCGAGTTGCTTT--CCGGCGAAGA 36802 Query 151975 TAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGTCT 152034 | | | ||| ||||||| | |||||| ||||| || ||||| || ||||| | | Sbjct 36803 TCAATCGCTGTTGGTCCGGTGGGATTCCCTCCTTATCCTGAATCTTGCTCTTGACGTTGT 36862 Query 152035 CTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGA 152094 | | | |||| || ||| || || || || ||||| ||||||||||| |||||||||| Sbjct 36863 CGATGGTGTCGGACGACTCCACCTCGAGGGTGATAGTCTTGCCCGTGAGGGTCTTCACGA 36922 Query 152095 A 152095 | Sbjct 36923 A 36923 >seq5787 Length=111344 Score = 100 bits (110), Expect = 7e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 |||||| ||||| || || ||||| || ||||||||||| || | | || | || || Sbjct 90946 GAGGACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGGCCGTC 90887 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 || || || ||||||||||| | | ||| ||||| | | || || ||||| || Sbjct 90886 CTCGAGTTGCTTGCCGGCGAAGATCAATCGCTGTTGGTCTGGGGGAATGCCCTCCTTGTC 90827 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 || || || ||||| | || | | |||| ||| ||| || || | || || || Sbjct 90826 CTGGATCTTAGACTTGACGTTGTCGATGGTGTCCGAAGACTCCACCTCCAAGGTGATCGT 90767 Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| ||||||||||| ||||||| |||||| Sbjct 90766 CTTGCCAGTGAGAGTCTTGACGAAGATCTGCAT 90734 Score = 95.1 bits (104), Expect = 3e-14 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 151913 CTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCGGCGAA 151972 ||| || || ||||||||||| | | || | || || || || || |||||||| Sbjct 91153 CTCCTTCTGAATGTTGTAATCAGAAAGTGTCCGGCCGTCCTCAAGCTGCTTGCCGGCGAA 91094 Query 151973 GATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGT 152032 ||| || | ||| || |||| | ||| || ||||| |||||||| || || || | Sbjct 91093 GATGAGGCGCTGTTGATCCGGTGGGATACCCTCCTTGTCTTGAATCTTCGACTTCACGTT 91034 Query 152033 CTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCAC 152092 || | ||||||| ||| ||||| || || ||||| ||||| ||||| ||||| || Sbjct 91033 GTCGATTGTGTCTGATGACTCCACTTCGAGTGTGATAGTCTTGCCGGTGAGTGTCTTGAC 90974 Query 152093 GAAGACCTGCAT 152104 ||||| ||||| Sbjct 90973 GAAGATTTGCAT 90962 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153731065192970