Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zymoseptoria_20brevis_20[genbank_20GCA_5F000966595.1_202015-03-31] 6,070 sequences; 31,914,300 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq5787 132 3e-26 seq360 102 6e-17 seq351 89.7 4e-13 >seq5787 Length=111344 Score = 132 bits (146), Expect = 3e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 44110 TCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGC 44169 ||| || | ||| | | ||||| ||| || ||||||||||| || ||||||||||| | Sbjct 91189 TCCTCCACGCAGACGGAGCACCAAGTGCAGGGTGCTCTCCTTCTGAATGTTGTAATCAGA 91130 Query 44170 GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGG 44229 ||| || |||| || |||||||| ||||| ||||| | ||||| ||||| | || Sbjct 91129 AAGTGTCCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATGAGGCGCTGTTGATCCGGTGG 91070 Query 44230 CACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCAC 44289 | ||| ||||| || |||||| ||||| | | || ||||| | || ||||| Sbjct 91069 GATACCCTCCTTGTCTTGAATCTTCGACTTCACGTTGTCGATTGTGTCTGATGACTCCAC 91010 Query 44290 CTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || | || || ||||| || ||||| ||||| |||||||||||||| Sbjct 91009 TTCGAGTGTGATAGTCTTGCCGGTGAGTGTCTTGACGAAGATTTGCAT 90962 Score = 129 bits (142), Expect = 4e-25 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || || || ||||| |||||| ||||||||||| || | ||| ||| |||| || Sbjct 90942 ACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGGCCGTCCTCG 90883 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 || ||||| ||||| |||||||| ||||| || |||| || | || ||||| ||| Sbjct 90882 AGTTGCTTGCCGGCGAAGATCAATCGCTGTTGGTCTGGGGGAATGCCCTCCTTGTCCTGG 90823 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||| | | | |||||||| | || |||||||||| || |||||||| Sbjct 90822 ATCTTAGACTTGACGTTGTCGATGGTGTCCGAAGACTCCACCTCCAAGGTGATCGTCTTG 90763 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || ||||| ||||| |||||||| ||||| Sbjct 90762 CCAGTGAGAGTCTTGACGAAGATCTGCAT 90734 >seq360 Length=110533 Score = 102 bits (112), Expect = 6e-17 Identities = 138/189 (73%), Gaps = 4/189 (2%) Strand=Plus/Plus Query 44142 TGCTCTCCTTTTGGATGTTGTAATCGGCGA--GTTGGCGCTCGTCGTCCAGCTGCTTCCC 44199 ||| | |||| ||||||||||| ||| | ||| | || | || || || ||||| || Sbjct 36737 TGCGCACCTTCTGGATGTTGTAGTCGCTCAAAGTTCG-GC-CATCCTCGAGTTGCTTTCC 36794 Query 44200 GGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT 44259 ||| |||||||| ||||| || || | || | || ||||| ||| ||||| ||| Sbjct 36795 GGCGAAGATCAATCGCTGTTGGTCCGGTGGGATTCCCTCCTTATCCTGAATCTTGCTCTT 36854 Query 44260 CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGT 44319 | | | |||||||||| || |||||||| | || || ||||| ||||||||||| Sbjct 36855 GACGTTGTCGATGGTGTCGGACGACTCCACCTCGAGGGTGATAGTCTTGCCCGTGAGGGT 36914 Query 44320 CTTCACGAA 44328 ||||||||| Sbjct 36915 CTTCACGAA 36923 >seq351 Length=85052 Score = 89.7 bits (98), Expect = 4e-13 Identities = 61/69 (88%), Gaps = 0/69 (0%) Strand=Plus/Minus Query 44270 ATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAG 44329 |||||||||| ||||||||||| | || |||||||| ||||||||||||||||||||| Sbjct 50211 ATGGTGTCGGACGATTCCACCTCGAGGGTGATCGTCTTGCCCGTGAGGGTCTTCACGAAG 50152 Query 44330 ATTTGCATG 44338 || |||||| Sbjct 50151 ATCTGCATG 50143 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359963768585190