Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zymoseptoria_20brevis_20[genbank_20GCA_5F000983655.1_202015-04-30]
6,895 sequences; 36,104,098 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq1700 159 4e-34
>seq1700
Length=96718
Score = 159 bits (176), Expect = 4e-34
Identities = 552/852 (65%), Gaps = 13/852 (2%)
Strand=Plus/Plus
Query 16674 TTTGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCT 16733
|||||||||| | || || || ||||| ||||| || ||||| | || || || ||||
Sbjct 69179 TTTGGTAATCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCTCCGAGGGAGATGTTCT 69238
Query 16734 CCATGAAATCAAAAGGATTAGTAGC-TGAAAATATTTTAGAGTACCCCAGTTCGGCGATT 16792
||||||| || || || || ||||| | | | || | || || ||| | ||
Sbjct 69239 CCATGAAGTCGAAGGGGTTGGTAGCGTTGTAGTGCTTCTG-GTTGCCGAGTGCCAGGAGG 69297
Query 16793 AATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAGA 16852
| | || || || || || || ||||||||||| | | | ||||||||| | ||
Sbjct 69298 AGACGGTCGGCGACGAACTCGATGTATTGGCACATGAGCTTGGCGTTCATTCCGAGGAG- 69356
Query 16853 CGTACC-GGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAAT 16911
|| || || || || || || | || ||||| || || || || || | || ||
Sbjct 69357 CGCACATGGGAGGGCGTCTGTGAGGAACTCCTGCTCGATGACGACAGCCTCGGTGATGAT 69416
Query 16912 ACTAGCAACTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGACATGCGAA 16971
|||| || | || || | | || || || |||| ||| || || ||
Sbjct 69417 GTCTTCAACGACTTGGTTTGATGGCTTGTTGTTGAGGTGAGAGAACAGCAGGCAGGCAAA 69476
Query 16972 ATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCAT 17031
||| || | |||||||| | | ||| || ||||| || || || | ||||||||
Sbjct 69477 GTCGGTGTGCATGCCCTCGTCACGGGAGATGAGCTCGTTGGAGAAGGTGAGGCCGGGCAT 69536
Query 17032 CTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTC 17091
|| || ||||| ||||| || |||| ||||| || || || ||||| ||||||||
Sbjct 69537 GAGACCACGCTTCTTCAACCAGAAGATCGATGCGAAAGATCCGGAGAAGAAGATACCCTC 69596
Query 17092 GACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCATTT 17151
| || ||||| ||||| | || ||| | || | || |||| |||||
Sbjct 69597 AATGGCGGCAAAGGCGATGAGACGGCAGGCAAAGGTGGAGTTCTTGTCGGAGATCCACCG 69656
Query 17152 CTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAATAATTT 17211
| || |||| || || || | ||||| || | || ||||| || || | |
Sbjct 69657 CAGCGCCCAGTCAGCCTTCTTACGGATGCATGGGATGTTGTCGATGGCGTTGAAGAGGTA 69716
Query 17212 CTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTG 17271
| || || | ||| | || || || |||||||| ||| ||| | ||||||||
Sbjct 69717 CGTGCGTTGCTTGGGCTCGCTGATGTATGTGTCGATGAGGAGGGAGTATGTCTCGGAGTG 69776
Query 17272 TATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTC 17331
||||||||||| ||||| || ||||| ||||| ||||| || | ||||| |||||
Sbjct 69777 GATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAGCGGGCCTCGGGGATTTGCACTTC 69836
Query 17332 CACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGC 17391
|| ||| || || || || ||||| |||||||| || || ||||| || ||
Sbjct 69837 TCCGCTGAAGCGCTCGATGAGGTTCTCGTTGACGATGCCATCCGAAGCAGCGAAGAAGGC 69896
Query 17392 CAATATATGCTTAATGAAATATTTTTCGTC--CGGTGTAAGAACGC----GCCAGTCCTT 17445
|| | || ||||| | ||||| || || || |||| |||||| |
Sbjct 69897 CAGGACGTGGGAGATGAAGAAGCGCTCGTCGTCGTTG--AG-ACGCTTGTTCCAGTCGTG 69953
Query 17446 TAAATCTTTGGATATATCCACTTCTTCGGGGGTCCAAAAACTAGCCACTGCCTTTTTATA 17505
| ||| ||||| | ||| | || |||| |||||| || ||| | |||||||| ||
Sbjct 69954 AAGATCCTTGGAGAGATCGATCTCCTCGGCGGTCCAGAAGGAGGCCTCGGCCTTTTTGTA 70013
Query 17506 CATATTCCAAAT 17517
||| | ||| ||
Sbjct 70014 CATTTGCCAGAT 70025
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517500994038600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |