Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zymoseptoria_20brevis_20[genbank_20GCA_5F000983655.1_202015-04-30] 6,895 sequences; 36,104,098 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq1700 381 6e-101 seq1789 129 6e-25 seq1447 100 3e-16 seq5725 95.1 1e-14 >seq1700 Length=96718 Score = 381 bits (422), Expect = 6e-101 Identities = 576/804 (72%), Gaps = 15/804 (2%) Strand=Plus/Minus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||||||||||||||| || |||||||||| ||||||| | || || Sbjct 70025 ATCTGGCAAATGTACAAAAAGGCCGAGGCCTCCTTCTGGACCGCCGAGGAGATCGATCTC 69966 Query 116696 TCCAAGGACACGAGCGACTGGGA---GCGCTTGAACGACAACGAGCGCCATTTCATCAAG 116752 |||||||| ||||||| | ||| | |||||| |||||||| |||||| Sbjct 69965 TCCAAGGATCTTCACGACTGGAACAAGCGTCTCAACGACGACGAGCGCTTCTTCATCTCC 69906 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812 ||||| |||||||| ||||| || || ||||||||||||||||| || ||||||| Sbjct 69905 CACGTCCTGGCCTTCTTCGCTGCTTCGGATGGCATCGTCAACGAGAACCTCATCGAGCGC 69846 Query 116813 TTC-GCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCAT 116871 ||| || || || |||| | ||||||| || |||||||||||||| |||||| || Sbjct 69845 TTCAGCGGAGAAG-TGCAAATCCCCGAGGCCCGCTGCTTCTACGGCTTCCAGATCATGAT 69787 Query 116872 GGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGTGCGCTCTTCGGA 116931 ||||||| | ||||| || | || || |||||||||||| ||| | || | | Sbjct 69786 GGAGAACATCCACTCCGAGACATACTCCCTCCTCATCGACACATACATCAGCGAGCCCAA 69727 Query 116932 GGAGAAGCTCCGT--TTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCC 116989 | | | || ||| | || ||||||||||| | || || ||| || ||||||| Sbjct 69726 GCA-ACGC-ACGTACCTCTTCAACGCCATCGACAACATCCCATGCATCCGTAAGAAGGCT 69669 Query 116990 GAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCC 117049 || ||||||||||| |||||| ||| || | || |||| | | || || | ||| Sbjct 69668 GACTGGGCGCTGCGGTGGATCTCCGACAAGAACTCCACCTTTGCCTGCCGTCTCATCGCC 69609 Query 117050 TTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAG 117109 || || ||| | ||||| ||||||| || || |||||| | || || ||| | ||| Sbjct 69608 TTTGCCGCCATTGAGGGTATCTTCTTCTCCGGATCTTTCGCATCGATCTTCTGGTTGAAG 69549 Query 117110 AAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGT 117169 || || || |||||||||||||| || ||| |||||||||||||||| | |||||||| Sbjct 69548 AAGCGTGGTCTCATGCCCGGCCTCACCTTCTCCAACGAGCTCATCTCCCGTGACGAGGGC 69489 Query 117170 CTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGAGCGCGGCG 117229 |||| |||||||||||| |||||||| || | || | | | | | | Sbjct 69488 ATGCACACCGACTTTGCCTGCCTGCTGTTCTCTCACCT-CAACAACAAGCCATCAAACCA 69430 Query 117230 CG-CGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGAAGC 117288 | ||| || ||| ||||||| || |||| |||||||||| |||||||| || || Sbjct 69429 AGTCGTTGAAGACATCATCACCGAGGCTGTCGTCATCGAGCAGGAGTTCCTCACAGACGC 69370 Query 117289 GCTGCC-GGTGCGTCTGCTGGGACTCAATTGCGAAAC-GATGTCGCAATACATCGAGTTC 117346 || || ||||| || || ||| | || || || | |||| ||||||||||||||| Sbjct 69369 CCTCCCATGTGCG-CTCCTCGGAATGAA-CGCCAAGCTCATGTGCCAATACATCGAGTTC 69312 Query 117347 GTCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAACACGCCCAACCCG 117406 ||||||||| | || || || | || | | | |||||||||||| | ||||||| Sbjct 69311 GTCGCCGACCGTCTCCTCCTGGCACTCGGCAACCAGAAGCACTACAACGCTACCAACCCC 69252 Query 117407 CTGGACTTTATGAACCTCATCTCC 117430 | ||||| ||| | ||||||| Sbjct 69251 TTCGACTTCATGGAGAACATCTCC 69228 >seq1789 Length=118145 Score = 129 bits (142), Expect = 6e-25 Identities = 156/210 (74%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || ||||| ||||| || |||||| | || || || | | Sbjct 19714 ATGCAGATCTTCGTCAAGACTCTCACTGGCAAGACGATCACCTTGGAGGTGGAGTCTTCG 19655 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| ||||| || || | ||||| |||||||| ||| | ||||| Sbjct 19654 GACACCATCGACAACG-TCAAGTCTAAGATCCAGGACAAGGAGGGCATTCCCCCAGACCA 19596 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 || ||| | |||| ||| ||||| || || || |||| ||||| ||| |||||||| Sbjct 19595 ACAGCGATTGATCTTCGCCGGCAAGCAACTCGAGGACGGCCGCACGCTCTCGGACTACAA 19536 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||||||||||||| | ||||| ||||| || Sbjct 19535 CATCCAGAAGGAGTCGACGCTCCATCTCGT 19506 Score = 118 bits (130), Expect = 1e-21 Identities = 100/123 (81%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 40783 GACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGAC 40842 ||||| |||||||| || | |||||||| || ||||||| |||||| || ||||| || Sbjct 19849 GACAAGGAGGGCATTCCTCCAGACCAGCAGCGTCTCATCTTCGCGGGAAAGCAGCTTGAG 19790 Query 40843 GACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTG 40902 || | ||||||||||| |||||||||||| ||||||||| |||| || || | ||| || Sbjct 19789 GATGGGCGCACCCTCAGCGACTACAACATTCAGAAGGAGTCCACTCTCCACTTGGTGCTG 19730 Query 40903 CGC 40905 ||| Sbjct 19729 CGC 19727 >seq1447 Length=163572 Score = 100 bits (110), Expect = 3e-16 Identities = 133/182 (73%), Gaps = 2/182 (1%) Strand=Plus/Minus Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758 ||||| || || ||||||||||| || |||||| |||| || || | |||||| | | Sbjct 89221 TTCGTGAAGACCCTCACGGGCAAGACTATCACCCTCGAGGTGGAGTCGTCCGACACCATC 89162 Query 40759 CA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACT 40817 | |||| ||||| || || | || || ||||| ||||| ||||||| || ||| | Sbjct 89161 GACAACG-TCAAGAGCAAGATCCAGGATAAGGAGGGAATCCCACCGGACCAACAGCGATT 89103 Query 40818 CATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAA 40877 |||| ||| || || || || || || | || || | | |||||||||||||||||| Sbjct 89102 GATCTTCGCCGGAAAGCAACTCGAGGATGGCCGAACTTTGAGCGACTACAACATCCAGAA 89043 Query 40878 GG 40879 || Sbjct 89042 GG 89041 >seq5725 Length=16029 Score = 95.1 bits (104), Expect = 1e-14 Identities = 87/110 (79%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 40783 GACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGAC 40842 ||||| || ||||| || ||||||| || || || |||| ||| ||||| ||||| || Sbjct 12332 GACAAGGAAGGCATTCCACCGGACCAACAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAG 12391 Query 40843 GACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCA 40892 |||| || |||||| |||||||||||||||||||||| | || || || Sbjct 12392 GACGGCCGAACCCTCTCCGACTACAACATCCAGAAGGAGTCGACCCTCCA 12441 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515174794545200