Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zymoseptoria_20brevis_20[genbank_20GCA_5F000983655.1_202015-04-30] 6,895 sequences; 36,104,098 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq3886 86.0 1e-11 >seq3886 Length=23996 Score = 86.0 bits (94), Expect = 1e-11 Identities = 103/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 254202 TGTCCGCCTTTCAAGCTCGTGATCCTGGACGAGGCGGACACCATGACGGCCGACGCGCAG 254261 ||||| || | |||| || | ||| ||||||||||||| | |||||| ||||||||| Sbjct 17198 TGTCCACCATACAAGATCATCATCTTGGACGAGGCGGATAGCATGACACAGGACGCGCAG 17257 Query 254262 TCCGCCCTCCGCCGAACGATGGAGACGCACTCCGTTGTGACGCGTTTTTGCCTGGTGTGC 254321 || | ||| | ||||||||||| | || | || || ||||||||| | ||| Sbjct 17258 AGTGCATTACGCAGGACGATGGAGACATATTCGAAAATCACACGGTTTTGCCTGATCTGC 17317 Query 254322 AACTACGTGTCGAAGATCAT 254341 || |||||| ||| |||||| Sbjct 17318 AATTACGTGACGAGGATCAT 17337 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073671541127360