Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zymoseptoria_20brevis_20[genbank_20GCA_5F000983655.1_202015-04-30] 6,895 sequences; 36,104,098 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq3840 408 4e-109 seq1700 187 2e-42 >seq3840 Length=90666 Score = 408 bits (452), Expect = 4e-109 Identities = 1238/1889 (66%), Gaps = 46/1889 (2%) Strand=Plus/Plus Query 22105 CTTGTCCACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATGCC 22164 || ||| || || ||||| |||| | |||| |||||||||| || |||||||| Sbjct 33892 CTGGTCGACGGTGAACTGAATGGGCGCAGACGCCGCCATGGTGCGAAGGTAGTACATGCC 33951 Query 22165 CGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAACTCGG 22224 |||||||| || | |||||| || || || || || | ||| || | || Sbjct 33952 AGTCTTCAGGCCGAGCTTCCAGCCGGCGAAGTGCATGCTGGTGATTTTGCCCATGGTGGG 34011 Query 22225 CAAGTCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGCGGC 22284 | | ||||| | || | |||| ||||||||| || || || || || |||| Sbjct 34012 CTCCTTCATGTGGATGTTCAGGCTCTGAGACTGATCGATGAAAGCACCACGGTCAGCGGA 34071 Query 22285 CATATTTATCAATGTA-CGCATCGACATTTCCCATACGGTCTTGTACAGTTGCCTGATCT 22343 ||| | | | |||| ||| || ||||| |||||||||||||| | ||| | Sbjct 34072 CATCTGAA-CGATGTGGCGCTGGCTGATCTCCCAGACGGTCTTGTACAGAGCCTTGAGGT 34130 Query 22344 CTAACGGTATCGATTCGA-TCCTCTGGACGGACCCGTTATTGTGTATGATCAAATTTTTA 22402 | || || | || || | | ||||| ||| || || | ||||| || || Sbjct 34131 CATCGGGGAT-GTTTGGAATGCGCTGGATGGAACCACCATCGGCGATGATGCGGTTCTTC 34189 Query 22403 ATCGTATCGTTCCACAAACCGATGGCGGTCAAATCTTTGACCAGATGACGG-TTCACCAC 22461 || | || ||| | || || ||| || || | || | |||| || || || Sbjct 34190 ATGTTGTCTGACCAGAGGCCACGCTCGACCAAGTCCTTCAGCA-ACCACGGGTTGACAAC 34248 Query 22462 TTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAAGA 22521 || ||||| || | | || || || ||| |||||| ||| | || |||||| | Sbjct 34249 CTGGAACTCACCAGCGAGCACACGACGGGAGTAGATGTTGCTGGTGTATGGCTCGAAACA 34308 Query 22522 TTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGCGA 22581 || ||| |||| ||||| | ||| || || || ||||| || || | || ||||| Sbjct 34309 CTCGTTGAAGCCCATGATCTGCGAGGTGGACGCAGTTGGCATGGGAGCGACGAGGAGCGA 34368 Query 22582 GTTTCTCAAGCCGTGCTTTGAAATTTTACTCTTGAGCATCGACCAGTCCCACAGATCGGA 22641 ||| | | || |||| | || || |||||| | ||||||||| ||||| | Sbjct 34369 GTTGCGGACACCATGCTCGGCGATCTTGGCCTTGAGTGCGGCCCAGTCCCAGAGATCAGT 34428 Query 22642 CGGCGTCACATTGTCCCACATATCGTATTGCAACACGCCGC--GACTCGCCGGGCTGCCT 22699 || |||||| ||||||| |||||||| | | |||| || || || | || Sbjct 34429 AGGAGTCACAC---CCCACATGTCGTATTGGAGCTCGCCCTTGGAGACGGGGGAC--CCC 34483 Query 22700 TCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTCCAACGCGCCG 22759 ||||| || ||||| || ||| | || || || ||||| || | || || Sbjct 34484 TCGTATGTCTCGTATGGTCCAAGCTTGGCAGCGAGATCGCATGAGGCGGTGAGAGCAGCG 34543 Query 22760 TAATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCG-GC----GGCGACGCTTTCGT 22814 | || || ||||||||||| | |||| | | |||| || || || || Sbjct 34544 TGGTAGATGGTCTCGAAGATCTGGATGTTGAGCT-GGCGAGCCTCAGGAGAG----TCAA 34598 Query 22815 ACGGCATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGATCGGTC 22874 | ||||| |||| || ||| || || || | ||| | || || | |||||| || | Sbjct 34599 AAGGCATGCGCAGAGCCAAGAAAGCATCAGCAAGACCGTTGACACCAAGACCGATGGGAC 34658 Query 22875 GGTTTTTCAGATTCGACACTTTTG--CCTCGGGCAAAGGATACCAATTCGAATCGATTGT 22932 ||| | || | ||| | | || |||| || || || ||||| | Sbjct 34659 GGTGACGGAAGTTG--CTCTTGCGAGCTTCTGGCACGGGGTAGTGGTTGACCTCGATGAT 34716 Query 22933 TCTGTTCAAGTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGTCGTAAAC 22992 |||||||||| |||| || | | || | || |||||| |||| Sbjct 34717 CTTGTTCAAGTTCTTGGTGACGGTCTGGGTGACCTGGTGGAGCTTCTCGAAGTCG-AAAC 34775 Query 22993 GCCCGAT-----TGTACAACAAACTTGTTGACGGCGATCGAGGCAAGATTGCATACGGCC 23047 || || | ||| | || | || | ||||| || ||||| ||||| ||||| Sbjct 34776 GCTCGTTCTCAATGT-CGACGTATGTGGGCAGGGCGAGAGATGCAAGGTTGCACACGGCG 34834 Query 23048 ACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTG 23107 |||||||| | |||||||| | ||| ||||| || |||||| | || || Sbjct 34835 ACCTCGTCAGGAGCAGTGTACTCGATAATCTCGGTGCAGAGATTGGAGCTGCGGATGGTT 34894 Query 23108 CCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTG 23167 ||||| || |||||||||| || | ||| | ||||||||||| ||||| || || Sbjct 34895 CCCAAGTTCTTCTGGTTGCTCTTGCTGTTGGCAGCGTCCTTGTAGAGGATGTATGGGGTA 34954 Query 23168 CCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGTGAACACGTCGC 23227 || |||||| || | ||||| ||| || ||| | |||||||| | || ||| | Sbjct 34955 CCGGTCTCGGTTTGAGCCTCGAGGATGGCATACCAGAGCTTCTGAGCGCGGACG-GTCTC 35013 Query 23228 ACGTACCT-GCCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGTA-AC 23285 ||| ||| ||| || |||||| | ||||| | | || || || || ||||| || Sbjct 35014 ACGACCCTTGCCCTCACGCTCGTATCGCTCGTACAGCTCCTCGAACTCAGCGCCGTAGAC 35073 Query 23286 AGTCGGCCAGGCCGGGCGATTGCATCGGACACATGAGACTCCACATTGAGTCATTTTCAA 23345 | || ||||| ||||| | | || ||||| | | |||| | | | | |||| Sbjct 35074 A-TCAGCCAGACCGGGGCACTCGTGAGGGCACATCAAAGTCCAGGTGGTATTTTGCTCAA 35132 Query 23346 CGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCT 23405 | || |||| || ||||| || | ||| ||| |||||||||| ||||| || || |||| Sbjct 35133 CACGCTTCATGAAGAGATCTGGGACCCACAGACCGTAGAACAGATCGCGAGCACGAACCT 35192 Query 23406 CCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCT 23465 |||| || ||| |||||| | |||||| ||| || || || || ||||| |||| Sbjct 35193 CCTCCTTTCCGTGGTTCTTGCGGAGATCCAAGAAGGAGAAGACATCTGCGTGCCATGGCT 35252 Query 23466 CGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCG 23525 ||| ||| | |||||| || || |||| ||| ||||||||||| |||||||| || || | Sbjct 35253 CGATGTACATGGCAAAAGCACCAGGTCGCTTGTTGCCGCCCTGGTCGACGTAGCGAGCGG 35312 Query 23526 TGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCA 23585 ||||||| |||| | ||||| || |||||||||||||| | ||| ||| | Sbjct 35313 TGTTGTTAAACACACGCAGCATGGGTACGAGACCGTTGGATGTTCCGTTGGTGCCGCTGA 35372 Query 23586 CACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCG 23645 | || |||| |||| |||| |||| || || ||||||||| | || | Sbjct 35373 TGTATGCTCCGGTTGCGCGAATTCTGTGGACGTTGAGCCCAATGCCTCCGGCGTTCTTGG 35432 Query 23646 ATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCG 23705 | ||||| ||||| || | ||||||||||| || || |||||||| ||||| | Sbjct 35433 AGATCATGGCGCAGGTCTTTAATGTGTCGTAGATCCCATCAATGCTGTCATCTTTCATGT 35492 Query 23706 CGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGC 23765 ||| | ||| || || | || ||| || ||||| || | || |||||| || || Sbjct 35493 CGATGAGGAAGCAGGATGCCAGTTGAGCGTTGGGTGTTCCAGCGCTGAACAGCGTAGGCG 35552 Query 23766 TGGCGTGCGTAAAGTATCCATTCGACAT-TAGATTGTACGTGTCGATGGCGGCATCAATG 23824 || || || ||||| |||||||| ||| ||||| || || ||||||| || ||| Sbjct 35553 ACGCATGTGTGAAGTACTTGTTCGACATGTAG-TTGTAGGTCTCAATGGCGGACTCGATG 35611 Query 23825 TCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCG---ACC 23881 ||||| ||||| || |||| ||| || ||||| ||||| | ||| ||||||||| ||| Sbjct 35612 TCCTCGCCGTGGATGCCGACGGCCACACGCATGATCATCTGTTGTGGTCTCTCGGCAACC 35671 Query 23882 GTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGTCA 23941 | |||||| || | || || ||||| | | || ||| || |||||||| || | Sbjct 35672 TT---GCCGTTGATCCTCAAAAGGTATGACCTCTCCAGCGTCTTGAATCCAAAGTATTGG 35728 Query 23942 TAGTTAAAGTCACGATCGTGCACTATGGC 23970 ||||| |||||||| |||| || ||||| Sbjct 35729 TAGTTGAAGTCACGGTCGTAAACGATGGC 35757 >seq1700 Length=96718 Score = 187 bits (206), Expect = 2e-42 Identities = 556/846 (66%), Gaps = 25/846 (3%) Strand=Plus/Minus Query 57562 ATCCAGACATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAG 57621 ||| | | || ||| | |||||||||||||| || || || || ||||||| ||| || Sbjct 70033 ATCAACAGATCTGGCAAATGTACAAAAAGGCCGAGGCCTCCTTCTGGACCGCCGAGGAGA 69974 Query 57622 TAGACCTGTCTAAGGATCTGAGCGATTGGGATTCCC---TCAAAGAATCTGAGAGAAATT 57678 | || || || |||||||| ||| ||| | | |||| || ||| | | Sbjct 69973 TCGATCTCTCCAAGGATCTTCACGACTGGAACAAGCGTCTCAACGACGACGAGCGCTTCT 69914 Query 57679 TTATTAAACACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGG 57738 | || ||||| |||| || ||||| || || ||||| || || |||||||| | Sbjct 69913 TCATCTCCCACGTCCTGGCCTTCTTCGCTGCTTCGGATGGCATCGTCAACGAGAACCTCA 69854 Query 57739 TCGAAAGATTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAG 57798 |||| | || |||||||||| | | ||||| | ||||| ||||| || || Sbjct 69853 TCGAGCGCTTCAGCGGAGAAGTGCAAATCCCCGAGGCCCGCTGCTTCTACGGCTTCCAGA 69794 Query 57799 TGGCCATTGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGG 57858 | || || ||| | || || || | || || || |||||||| || ||| | | | Sbjct 69793 TCATGATGGAGAACATCCACTCCGAGACATACTCCCTCCTCATCGACACATACATCAGCG 69734 Query 57859 A---CAA-CGACGAGAAACGTAGACTGTTCAACGCGATCGAAACAATGCCCGCGATCGCC 57914 | ||| | ||| ||||| || |||||||| ||||| | || || ||| Sbjct 69733 AGCCCAAGCAACGC---ACGTAC-CTCTTCAACGCCATCGACAACATCCCATGCATCCGT 69678 Query 57915 AAGAAGGCAGAGTGGTCAATCAAATGGATAAAAAGCGCCACGG---CCACGTTCGCCGAG 57971 |||||||| || ||| | | ||||| || || | |||| || ||| Sbjct 69677 AAGAAGGCTGACTGGGCGCTGCGGTGGATCTC---CGACAAGAACTCCACCTTTGCCTGC 69621 Query 57972 AGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTT-GCGGCAAT 58030 | || ||||| || |||||| | || ||||| ||||| || || | |||| || | || Sbjct 69620 CGTCTCATCGCCTTTGCCGCCATTGAGGGTATCTTCTTCTCCGG-ATCTTTCGCATCGAT 69562 Query 58031 ATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATC 58090 || ||| ||||||| || || || ||||||||||| || || ||||||| | || || Sbjct 69561 CTTCTGGTTGAAGAAGCGTGGTCTCATGCCCGGCCTCACCTTCTCCAACGAGCTCATCTC 69502 Query 58091 GCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAA 58150 || |||||||| | || || || ||||| ||||| ||| ||||||| | ||| || Sbjct 69501 CCGTGACGAGGGCATGCACACCGACTTTGCCTGCCTGCTGTTCTCTCACCTCAACAACAA 69442 Query 58151 ACCGACGCGGGATCGCATC-TTG--GACATTATCACCGAGGCGGTCGCGATCGAAAATGA 58207 || | | | || ||| ||||| ||||||||||| |||| ||||| | || Sbjct 69441 GCCATC---AAACCAAGTCGTTGAAGACATCATCACCGAGGCTGTCGTCATCGAGCAGGA 69385 Query 58208 GTTTGTCACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAA 58267 ||| |||| || ||||| || || | ||||| |||||| | | |||| | Sbjct 69384 GTTCCTCACAGACGCCCTCCCATGTGCGCTCCTCGGAATGAACGCCAAGCTCATGTGCCA 69325 Query 58268 GTACATTGAGTTTGTTGCCGACAGACTTTTGCTCGAACTGATTGGAGAGCGTCATTACAA 58327 ||||| ||||| || |||||| | || | || | ||| || || ||||| Sbjct 69324 ATACATCGAGTTCGTCGCCGACCGTCTCCTCCTGGCACTCGGCAACCAGAAGCACTACAA 69265 Query 58328 CACGAAAAATCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACAAACTTTTT 58387 | | | || || || || || ||| | ||||| |||| |||||||| ||||| || Sbjct 69264 CGCTACCAACCCCTTCGACTTCATGGAGAACATCTCCCTCGGAGGCAAGACCAACTTCTT 69205 Query 58388 CGAAAA 58393 ||| || Sbjct 69204 CGAGAA 69199 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445727980508400