Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zymoseptoria_20brevis_20[genbank_20GCA_5F000983655.1_202015-04-30]
6,895 sequences; 36,104,098 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq3840 408 4e-109
seq1700 187 2e-42
>seq3840
Length=90666
Score = 408 bits (452), Expect = 4e-109
Identities = 1238/1889 (66%), Gaps = 46/1889 (2%)
Strand=Plus/Plus
Query 22105 CTTGTCCACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATGCC 22164
|| ||| || || ||||| |||| | |||| |||||||||| || ||||||||
Sbjct 33892 CTGGTCGACGGTGAACTGAATGGGCGCAGACGCCGCCATGGTGCGAAGGTAGTACATGCC 33951
Query 22165 CGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAACTCGG 22224
|||||||| || | |||||| || || || || || | ||| || | ||
Sbjct 33952 AGTCTTCAGGCCGAGCTTCCAGCCGGCGAAGTGCATGCTGGTGATTTTGCCCATGGTGGG 34011
Query 22225 CAAGTCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGCGGC 22284
| | ||||| | || | |||| ||||||||| || || || || || ||||
Sbjct 34012 CTCCTTCATGTGGATGTTCAGGCTCTGAGACTGATCGATGAAAGCACCACGGTCAGCGGA 34071
Query 22285 CATATTTATCAATGTA-CGCATCGACATTTCCCATACGGTCTTGTACAGTTGCCTGATCT 22343
||| | | | |||| ||| || ||||| |||||||||||||| | ||| |
Sbjct 34072 CATCTGAA-CGATGTGGCGCTGGCTGATCTCCCAGACGGTCTTGTACAGAGCCTTGAGGT 34130
Query 22344 CTAACGGTATCGATTCGA-TCCTCTGGACGGACCCGTTATTGTGTATGATCAAATTTTTA 22402
| || || | || || | | ||||| ||| || || | ||||| || ||
Sbjct 34131 CATCGGGGAT-GTTTGGAATGCGCTGGATGGAACCACCATCGGCGATGATGCGGTTCTTC 34189
Query 22403 ATCGTATCGTTCCACAAACCGATGGCGGTCAAATCTTTGACCAGATGACGG-TTCACCAC 22461
|| | || ||| | || || ||| || || | || | |||| || || ||
Sbjct 34190 ATGTTGTCTGACCAGAGGCCACGCTCGACCAAGTCCTTCAGCA-ACCACGGGTTGACAAC 34248
Query 22462 TTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAAGA 22521
|| ||||| || | | || || || ||| |||||| ||| | || |||||| |
Sbjct 34249 CTGGAACTCACCAGCGAGCACACGACGGGAGTAGATGTTGCTGGTGTATGGCTCGAAACA 34308
Query 22522 TTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGCGA 22581
|| ||| |||| ||||| | ||| || || || ||||| || || | || |||||
Sbjct 34309 CTCGTTGAAGCCCATGATCTGCGAGGTGGACGCAGTTGGCATGGGAGCGACGAGGAGCGA 34368
Query 22582 GTTTCTCAAGCCGTGCTTTGAAATTTTACTCTTGAGCATCGACCAGTCCCACAGATCGGA 22641
||| | | || |||| | || || |||||| | ||||||||| ||||| |
Sbjct 34369 GTTGCGGACACCATGCTCGGCGATCTTGGCCTTGAGTGCGGCCCAGTCCCAGAGATCAGT 34428
Query 22642 CGGCGTCACATTGTCCCACATATCGTATTGCAACACGCCGC--GACTCGCCGGGCTGCCT 22699
|| |||||| ||||||| |||||||| | | |||| || || || | ||
Sbjct 34429 AGGAGTCACAC---CCCACATGTCGTATTGGAGCTCGCCCTTGGAGACGGGGGAC--CCC 34483
Query 22700 TCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTCCAACGCGCCG 22759
||||| || ||||| || ||| | || || || ||||| || | || ||
Sbjct 34484 TCGTATGTCTCGTATGGTCCAAGCTTGGCAGCGAGATCGCATGAGGCGGTGAGAGCAGCG 34543
Query 22760 TAATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCG-GC----GGCGACGCTTTCGT 22814
| || || ||||||||||| | |||| | | |||| || || || ||
Sbjct 34544 TGGTAGATGGTCTCGAAGATCTGGATGTTGAGCT-GGCGAGCCTCAGGAGAG----TCAA 34598
Query 22815 ACGGCATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGATCGGTC 22874
| ||||| |||| || ||| || || || | ||| | || || | |||||| || |
Sbjct 34599 AAGGCATGCGCAGAGCCAAGAAAGCATCAGCAAGACCGTTGACACCAAGACCGATGGGAC 34658
Query 22875 GGTTTTTCAGATTCGACACTTTTG--CCTCGGGCAAAGGATACCAATTCGAATCGATTGT 22932
||| | || | ||| | | || |||| || || || ||||| |
Sbjct 34659 GGTGACGGAAGTTG--CTCTTGCGAGCTTCTGGCACGGGGTAGTGGTTGACCTCGATGAT 34716
Query 22933 TCTGTTCAAGTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGTCGTAAAC 22992
|||||||||| |||| || | | || | || |||||| ||||
Sbjct 34717 CTTGTTCAAGTTCTTGGTGACGGTCTGGGTGACCTGGTGGAGCTTCTCGAAGTCG-AAAC 34775
Query 22993 GCCCGAT-----TGTACAACAAACTTGTTGACGGCGATCGAGGCAAGATTGCATACGGCC 23047
|| || | ||| | || | || | ||||| || ||||| ||||| |||||
Sbjct 34776 GCTCGTTCTCAATGT-CGACGTATGTGGGCAGGGCGAGAGATGCAAGGTTGCACACGGCG 34834
Query 23048 ACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTG 23107
|||||||| | |||||||| | ||| ||||| || |||||| | || ||
Sbjct 34835 ACCTCGTCAGGAGCAGTGTACTCGATAATCTCGGTGCAGAGATTGGAGCTGCGGATGGTT 34894
Query 23108 CCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTG 23167
||||| || |||||||||| || | ||| | ||||||||||| ||||| || ||
Sbjct 34895 CCCAAGTTCTTCTGGTTGCTCTTGCTGTTGGCAGCGTCCTTGTAGAGGATGTATGGGGTA 34954
Query 23168 CCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGTGAACACGTCGC 23227
|| |||||| || | ||||| ||| || ||| | |||||||| | || ||| |
Sbjct 34955 CCGGTCTCGGTTTGAGCCTCGAGGATGGCATACCAGAGCTTCTGAGCGCGGACG-GTCTC 35013
Query 23228 ACGTACCT-GCCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGTA-AC 23285
||| ||| ||| || |||||| | ||||| | | || || || || ||||| ||
Sbjct 35014 ACGACCCTTGCCCTCACGCTCGTATCGCTCGTACAGCTCCTCGAACTCAGCGCCGTAGAC 35073
Query 23286 AGTCGGCCAGGCCGGGCGATTGCATCGGACACATGAGACTCCACATTGAGTCATTTTCAA 23345
| || ||||| ||||| | | || ||||| | | |||| | | | | ||||
Sbjct 35074 A-TCAGCCAGACCGGGGCACTCGTGAGGGCACATCAAAGTCCAGGTGGTATTTTGCTCAA 35132
Query 23346 CGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCT 23405
| || |||| || ||||| || | ||| ||| |||||||||| ||||| || || ||||
Sbjct 35133 CACGCTTCATGAAGAGATCTGGGACCCACAGACCGTAGAACAGATCGCGAGCACGAACCT 35192
Query 23406 CCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCT 23465
|||| || ||| |||||| | |||||| ||| || || || || ||||| ||||
Sbjct 35193 CCTCCTTTCCGTGGTTCTTGCGGAGATCCAAGAAGGAGAAGACATCTGCGTGCCATGGCT 35252
Query 23466 CGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCG 23525
||| ||| | |||||| || || |||| ||| ||||||||||| |||||||| || || |
Sbjct 35253 CGATGTACATGGCAAAAGCACCAGGTCGCTTGTTGCCGCCCTGGTCGACGTAGCGAGCGG 35312
Query 23526 TGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCA 23585
||||||| |||| | ||||| || |||||||||||||| | ||| ||| |
Sbjct 35313 TGTTGTTAAACACACGCAGCATGGGTACGAGACCGTTGGATGTTCCGTTGGTGCCGCTGA 35372
Query 23586 CACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCG 23645
| || |||| |||| |||| |||| || || ||||||||| | || |
Sbjct 35373 TGTATGCTCCGGTTGCGCGAATTCTGTGGACGTTGAGCCCAATGCCTCCGGCGTTCTTGG 35432
Query 23646 ATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCG 23705
| ||||| ||||| || | ||||||||||| || || |||||||| ||||| |
Sbjct 35433 AGATCATGGCGCAGGTCTTTAATGTGTCGTAGATCCCATCAATGCTGTCATCTTTCATGT 35492
Query 23706 CGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGC 23765
||| | ||| || || | || ||| || ||||| || | || |||||| || ||
Sbjct 35493 CGATGAGGAAGCAGGATGCCAGTTGAGCGTTGGGTGTTCCAGCGCTGAACAGCGTAGGCG 35552
Query 23766 TGGCGTGCGTAAAGTATCCATTCGACAT-TAGATTGTACGTGTCGATGGCGGCATCAATG 23824
|| || || ||||| |||||||| ||| ||||| || || ||||||| || |||
Sbjct 35553 ACGCATGTGTGAAGTACTTGTTCGACATGTAG-TTGTAGGTCTCAATGGCGGACTCGATG 35611
Query 23825 TCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCG---ACC 23881
||||| ||||| || |||| ||| || ||||| ||||| | ||| ||||||||| |||
Sbjct 35612 TCCTCGCCGTGGATGCCGACGGCCACACGCATGATCATCTGTTGTGGTCTCTCGGCAACC 35671
Query 23882 GTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGTCA 23941
| |||||| || | || || ||||| | | || ||| || |||||||| || |
Sbjct 35672 TT---GCCGTTGATCCTCAAAAGGTATGACCTCTCCAGCGTCTTGAATCCAAAGTATTGG 35728
Query 23942 TAGTTAAAGTCACGATCGTGCACTATGGC 23970
||||| |||||||| |||| || |||||
Sbjct 35729 TAGTTGAAGTCACGGTCGTAAACGATGGC 35757
>seq1700
Length=96718
Score = 187 bits (206), Expect = 2e-42
Identities = 556/846 (66%), Gaps = 25/846 (3%)
Strand=Plus/Minus
Query 57562 ATCCAGACATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAG 57621
||| | | || ||| | |||||||||||||| || || || || ||||||| ||| ||
Sbjct 70033 ATCAACAGATCTGGCAAATGTACAAAAAGGCCGAGGCCTCCTTCTGGACCGCCGAGGAGA 69974
Query 57622 TAGACCTGTCTAAGGATCTGAGCGATTGGGATTCCC---TCAAAGAATCTGAGAGAAATT 57678
| || || || |||||||| ||| ||| | | |||| || ||| | |
Sbjct 69973 TCGATCTCTCCAAGGATCTTCACGACTGGAACAAGCGTCTCAACGACGACGAGCGCTTCT 69914
Query 57679 TTATTAAACACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGG 57738
| || ||||| |||| || ||||| || || ||||| || || |||||||| |
Sbjct 69913 TCATCTCCCACGTCCTGGCCTTCTTCGCTGCTTCGGATGGCATCGTCAACGAGAACCTCA 69854
Query 57739 TCGAAAGATTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAG 57798
|||| | || |||||||||| | | ||||| | ||||| ||||| || ||
Sbjct 69853 TCGAGCGCTTCAGCGGAGAAGTGCAAATCCCCGAGGCCCGCTGCTTCTACGGCTTCCAGA 69794
Query 57799 TGGCCATTGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGG 57858
| || || ||| | || || || | || || || |||||||| || ||| | | |
Sbjct 69793 TCATGATGGAGAACATCCACTCCGAGACATACTCCCTCCTCATCGACACATACATCAGCG 69734
Query 57859 A---CAA-CGACGAGAAACGTAGACTGTTCAACGCGATCGAAACAATGCCCGCGATCGCC 57914
| ||| | ||| ||||| || |||||||| ||||| | || || |||
Sbjct 69733 AGCCCAAGCAACGC---ACGTAC-CTCTTCAACGCCATCGACAACATCCCATGCATCCGT 69678
Query 57915 AAGAAGGCAGAGTGGTCAATCAAATGGATAAAAAGCGCCACGG---CCACGTTCGCCGAG 57971
|||||||| || ||| | | ||||| || || | |||| || |||
Sbjct 69677 AAGAAGGCTGACTGGGCGCTGCGGTGGATCTC---CGACAAGAACTCCACCTTTGCCTGC 69621
Query 57972 AGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTT-GCGGCAAT 58030
| || ||||| || |||||| | || ||||| ||||| || || | |||| || | ||
Sbjct 69620 CGTCTCATCGCCTTTGCCGCCATTGAGGGTATCTTCTTCTCCGG-ATCTTTCGCATCGAT 69562
Query 58031 ATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATC 58090
|| ||| ||||||| || || || ||||||||||| || || ||||||| | || ||
Sbjct 69561 CTTCTGGTTGAAGAAGCGTGGTCTCATGCCCGGCCTCACCTTCTCCAACGAGCTCATCTC 69502
Query 58091 GCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAA 58150
|| |||||||| | || || || ||||| ||||| ||| ||||||| | ||| ||
Sbjct 69501 CCGTGACGAGGGCATGCACACCGACTTTGCCTGCCTGCTGTTCTCTCACCTCAACAACAA 69442
Query 58151 ACCGACGCGGGATCGCATC-TTG--GACATTATCACCGAGGCGGTCGCGATCGAAAATGA 58207
|| | | | || ||| ||||| ||||||||||| |||| ||||| | ||
Sbjct 69441 GCCATC---AAACCAAGTCGTTGAAGACATCATCACCGAGGCTGTCGTCATCGAGCAGGA 69385
Query 58208 GTTTGTCACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAA 58267
||| |||| || ||||| || || | ||||| |||||| | | |||| |
Sbjct 69384 GTTCCTCACAGACGCCCTCCCATGTGCGCTCCTCGGAATGAACGCCAAGCTCATGTGCCA 69325
Query 58268 GTACATTGAGTTTGTTGCCGACAGACTTTTGCTCGAACTGATTGGAGAGCGTCATTACAA 58327
||||| ||||| || |||||| | || | || | ||| || || |||||
Sbjct 69324 ATACATCGAGTTCGTCGCCGACCGTCTCCTCCTGGCACTCGGCAACCAGAAGCACTACAA 69265
Query 58328 CACGAAAAATCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACAAACTTTTT 58387
| | | || || || || || ||| | ||||| |||| |||||||| ||||| ||
Sbjct 69264 CGCTACCAACCCCTTCGACTTCATGGAGAACATCTCCCTCGGAGGCAAGACCAACTTCTT 69205
Query 58388 CGAAAA 58393
||| ||
Sbjct 69204 CGAGAA 69199
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445727980508400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |