Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zymoseptoria_20brevis_20[genbank_20GCA_5F000983655.1_202015-04-30] 6,895 sequences; 36,104,098 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq3840 104 5e-17 >seq3840 Length=90666 Score = 104 bits (114), Expect = 5e-17 Identities = 165/234 (71%), Gaps = 2/234 (1%) Strand=Plus/Plus Query 94792 CCTCCAGCAGTCTTGGAGATGATTGC-CGCCTCCTTAAGAGTATCATAAATACCCTCAAT 94850 ||||| || |||||||||| || || | || |||| || || || || || ||||| Sbjct 35417 CCTCCGGCGTTCTTGGAGATCATGGCGCAGGTCTTTAAT-GTGTCGTAGATCCCATCAAT 35475 Query 94851 GCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGGTGTGACTGTTCCACA 94910 ||| ||||||| | | | | |||||||| || | ||||| | || ||||||| Sbjct 35476 GCTGTCATCTTTCATGTCGATGAGGAAGCAGGATGCCAGTTGAGCGTTGGGTGTTCCAGC 35535 Query 94911 ATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATATGTTTC 94970 | ||||| || || || ||||| || || || | |||||||| | || || || Sbjct 35536 GCTGAACAGCGTAGGCGACGCATGTGTGAAGTACTTGTTCGACATGTAGTTGTAGGTCTC 35595 Query 94971 AATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACACGCATAATCAT 95024 |||| | || | |||||| ||||| |||||||| ||||||||||| ||||| Sbjct 35596 AATGGCGGACTCGATGTCCTCGCCGTGGATGCCGACGGCCACACGCATGATCAT 35649 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989496577984725