Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zymoseptoria_20brevis_20[genbank_20GCA_5F000983655.1_202015-04-30] 6,895 sequences; 36,104,098 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq3840 93.3 4e-14 >seq3840 Length=90666 Score = 93.3 bits (102), Expect = 4e-14 Identities = 161/229 (70%), Gaps = 10/229 (4%) Strand=Plus/Plus Query 154107 TTGCCGCCCTGATTTACGTGACGCACCATATTGTTGAAAACCCGAAGCATGGGTAGCAGA 154166 ||||||||||| | |||| || | | ||||| || || || |||||||||| ||| Sbjct 35285 TTGCCGCCCTGGTCGACGTAGCGAGCGGTGTTGTTAAACACACGCAGCATGGGTACGAGA 35344 Query 154167 CCGCTGGCGGTACCGTTTGTAGATTTAATCT-TGCT---GTTGCGGCCTCGAACGCTGTT 154222 ||| ||| || ||||| || | || | |||| |||||| |||| |||| Sbjct 35345 CCGTTGGATGTTCCGTTGGTGCCGCTGATGTATGCTCCGGTTGCG----CGAATTCTGTG 35400 Query 154223 TACGTTTAATCCAATACCGCCGCCGTGTTTGGAGATCATGGCGCAATCGTTCAATGTGTT 154282 ||||| | ||||| || ||| ||| ||||||||||||||||| || ||||||| Sbjct 35401 GACGTTGAGCCCAATGCCTCCGGCGTTCTTGGAGATCATGGCGCAGGTCTTTAATGTGTC 35460 Query 154283 ATAGATACCACGAATGCTATCGCTTTCCATGGTCAAT-AGGAAACATGA 154330 ||||| ||| |||||| || || ||| ||| || ||||| || || Sbjct 35461 GTAGATCCCATCAATGCTGTCATCTTTCAT-GTCGATGAGGAAGCAGGA 35508 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496021245484000