Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zymoseptoria_20brevis_20[genbank_20GCA_5F000983655.1_202015-04-30] 6,895 sequences; 36,104,098 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq1700 264 2e-65 seq3840 154 2e-32 >seq1700 Length=96718 Score = 264 bits (292), Expect = 2e-65 Identities = 597/886 (67%), Gaps = 31/886 (3%) Strand=Plus/Minus Query 125011 ATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGG 125070 |||| | || ||| |||||||||||||||| |||||||||| ||||| | ||| ||| Sbjct 70033 ATCAACAGATCTGGCAAATGTACAAAAAGGCCGAGGCCTCCTTCTGGACCGCCGAGGAGA 69974 Query 125071 TCGATCTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGT 125130 ||||||| |||||||| || |||| ||| | | ||| | | || ||||| | Sbjct 69973 TCGATCTCTCCAAGGATCTTCACGACTGGAACAAGCGTCTCAACGACGACGAGCGCTTCT 69914 Query 125131 TTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGT 125190 | || || ||| | |||||||||| || | || ||||| ||||||||||| || || Sbjct 69913 TCATCTCCCACGTCCTGGCCTTCTTCGCTGCTTCGGATGGCATCGTCAACGAGAACCTCA 69854 Query 125191 TGACACGATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAA 125250 | || ||| ||| || || || |||| ||||| ||||| ||||| | Sbjct 69853 TCGAGCGCTTCAGCGGAGAAGTGCAAATCCCCGAGGCCCGCTGCTTCTACGGCTTCCAGA 69794 Query 125251 TCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCG 125310 ||||||| |||||| | ||||| || | ||||| || || |||| ||||| ||| Sbjct 69793 TCATGATGGAGAACATCCACTCCGAGACATACTCCCTCCTCATCGACACATACATCAGCG 69734 Query 125311 ATCC---GCAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTA 125367 | || |||||| | || ||||| ||||| ||||||| | || | || |||| Sbjct 69733 AGCCCAAGCAACGCACGTAC---CTCTTCAACGCCATCGACAACATCCCATGCATCCGTA 69677 Query 125368 AAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGAC 125427 | |||||| | |||| | | ||||||||| ||| | || || | | ||| | | | Sbjct 69676 AGAAGGCTGACTGGGCGCTGCGGTGGATCTCCGACAAGAACTCCACCTTTGCCTGCCGTC 69617 Query 125428 TGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTT 125487 | | || || |||||| | ||||| |||||||| || || ||| || | ||||| | Sbjct 69616 TCATCGCCTTTGCCGCCATTGAGGGTATCTTCTTCTCCGGATCTTTCGCATCGATCTTCT 69557 Query 125488 GGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAG 125547 || | |||||||| || ||||||||||| || || | |||||| | || || || | Sbjct 69556 GGTTGAAGAAGCGTGGTCTCATGCCCGGCCTCACCTTCTCCAACGAGCTCATCTCCCGTG 69497 Query 125548 ACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTT-TCGCAACTATCTGCGTCCCGAG 125606 |||||||| | ||| ||||||||| || ||||| || || | || | | | Sbjct 69496 ACGAGGGCATGCACACCGACTTTGCCTGCCTGCTGTTCTCTCACC--TCAACAACAAGCC 69439 Query 125607 TGCAGATCCAG-CGATGAAAAGGTCATCAACATTGTAACCGATGCCGTGAGGATAGAACA 125665 || | | || || |||| | ||||| | ||||| || || || || || Sbjct 69438 ATCAAACCAAGTCGTTGAA---GACATCA------TCACCGAGGCTGTCGTCATCGAGCA 69388 Query 125666 AGAGTTTCTAACCGAATCCCTACC-GGTCAGCATGATTGGCATGAACTGCAAGCTAATGT 125724 ||||| || || || |||| || || || | | || |||||| |||||| |||| Sbjct 69387 GGAGTTCCTCACAGACGCCCTCCCATGTGCGC-TCCTCGGAATGAACGCCAAGCTCATGT 69329 Query 125725 GCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGG---CCGCAAGA 125781 || | ||||| ||||| || || || ||||| || | | | || || ||| Sbjct 69328 GCCAATACATCGAGTTCGTCGCCGACCGTCTCCT---CCTGGCACTCGGCAACCAGAAGC 69272 Query 125782 TTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACCA 125841 |||||||| | || ||||| || |||||| | ||| || || | || ||||||| Sbjct 69271 ACTACAACGCTACCAACCCCTTCGACTTCATGGAGAACATCTCCCTCGGAGGCAAGACCA 69212 Query 125842 ACTTTTTCGAGAAGAAGGTCAGCGAGTAC--AAACGCTACGGTGTC 125885 |||| ||||||||| ||| | || ||| ||| || ||||||| Sbjct 69211 ACTTCTTCGAGAAGCGTGTCGGTGATTACCAAAAGGC--CGGTGTC 69168 >seq3840 Length=90666 Score = 154 bits (170), Expect = 2e-32 Identities = 336/498 (67%), Gaps = 4/498 (1%) Strand=Plus/Minus Query 96876 CAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGAC 96935 ||||||||||| || || || || ||| | ||| | ||| | || || |||||||| || Sbjct 35295 CAGGGCGGCAACAAGCGACCTGGTGCTTTTGCCATGTACATCGAGCCATGGCACGCAGAT 35236 Query 96936 GTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGAC 96995 || || ||| | || | ||||| ||| || || |||| || || | || Sbjct 35235 GTCTTCTCCTTCTTGGATCTCCGCAAGAACCACGGAAAGGAGGAGGTTCGTGCTCGCGAT 35176 Query 96996 TTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGACGGTGGCTAC 97055 |||| || | || ||||| |||||| | ||||||||||| || | | | | | Sbjct 35175 CTGTTCTACGGTCTGTGGGTCCCAGATCTCTTCATGAAGCGTGTTGAGCAAAATACCACC 35116 Query 97056 TGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAGTTT 97115 |||| | |||||||| || || ||||||||| | ||| || |||| ||||| Sbjct 35115 TGGACTTTGATGTGCCCTCACGAGTGCCCCGGTCTGGCTGATGTCTACGGCGCTGAGTTC 35056 Query 97116 GAGGCCAAGTACACGGCCTACGAGCAAGAGGGCC-GATACGTGAGACGAGTCGATGCACG 97174 |||| |||| | ||||||| |||||| | |||||||| ||| || | Sbjct 35055 GAGGAGCTGTACGAGCGATACGAGCGTGAGGGCAAGGGTCGTGAGACC-GTCCGCGCTC- 34998 Query 97175 AGAA-CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCTCT 97233 |||| || ||| | |||||| | |||||| ||||| || || || ||||| |||| Sbjct 34997 AGAAGCTCTGGTATGCCATCCTCGAGGCTCAAACCGAGACCGGTACCCCATACATCCTCT 34938 Query 97234 ACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCTCCA 97293 ||||||| | | || |||| |||||||| ||||||| |||||| |||||| Sbjct 34937 ACAAGGACGCTGCCAACAGCAAGAGCAACCAGAAGAACTTGGGAACCATCCGCAGCTCCA 34878 Query 97294 ATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTTTGCGTTCTGG 97353 |||| ||||| || ||| | |||||| | |||| |||||| || || ||| || | Sbjct 34877 ATCTCTGCACCGAGATTATCGAGTACACTGCTCCTGACGAGGTCGCCGTGTGCAACCTTG 34818 Query 97354 CATCGGTCAATCTGCCCA 97371 |||| || ||||||| Sbjct 34817 CATCTCTCGCCCTGCCCA 34800 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740995329960200