Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zymoseptoria_20brevis_20[genbank_20GCA_5F000983655.1_202015-04-30] 6,895 sequences; 36,104,098 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq3840 325 1e-83 >seq3840 Length=90666 Score = 325 bits (360), Expect = 1e-83 Identities = 1156/1787 (65%), Gaps = 27/1787 (2%) Strand=Plus/Minus Query 363386 ATATTTTCGGATATAAGACGATGGAGAAATCCTACCTATCTCGTATCAATGGTGATATTG 363445 ||| ||| |||| |||||| |||||| || ||||| | | ||||| || | ||| Sbjct 35725 ATACTTT-GGATTCAAGACGCTGGAGAGGTCATACCTTTTGAGGATCAACGGCAAGGTTG 35667 Query 363446 TTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTG 363505 || | || || || ||| | |||||||| || | || ||||| || ||| | | Sbjct 35666 CCGAGAGACCACAACAGATGATCATGCGTGTGGCCGTCGGCATCCACGGCGAGGACATCG 35607 Query 363506 ATGCCGCGATTGAAACATATAAGCTTCTAAGT-GCTCGTGTA-TTCACGCACGCCACGCC 363563 | |||| ||||| || || || || | | || | | ||| ||||| || || |||| Sbjct 35606 AGTCCGCCATTGAGACCTACAA-CTAC-ATGTCGAACAAGTACTTCACACATGCGTCGCC 35549 Query 363564 AACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAAT 363623 || ||| || |||||||| | || | || || | || ||||| || | | || Sbjct 35548 TACGCTGTTCAGCGCTGGAACACCCAACGCTCAACTGGCATCCTGCTTCCTCATCGACAT 35489 Query 363624 GAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAA 363683 ||| || || ||| || || |||| |||||| | |||| || || | || ||||| Sbjct 35488 GAAAGATGACAGCATTGATGGGATCTACGACACATTAAAGACCTGCGCCATGATCTCCAA 35429 Query 363684 GAATGCAGGCGGAATTGGTGT-ATCGATCCACAATGTTCGTGCA--CAGAACAGTTACAT 363740 ||| || || || ||||| | | || |||||| |||| ||| | || || ||||| Sbjct 35428 GAACGCCGGAGGCATTGGGCTCAACG-TCCACAGAATTCGCGCAACCGGAGCA--TACAT 35372 Query 363741 TCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATAC 363800 ||||||| ||| || || || || || |||||||| ||||||||| |||| || Sbjct 35371 CAGCGGCACCAACGGAACATCCAACGGTCTCGTACCCATGCTGCGTGTGTTTAACAACAC 35312 Query 363801 TGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGA 363860 || | |||||||||||||| || ||||| || || ||||| ||||| |||| Sbjct 35311 CGCTCGCTACGTCGACCAGGGCGGCAACAAGCGACCTGGTGCTTTTGCCATGTACATCGA 35252 Query 363861 GCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGA 363920 ||| || || ||| | || || | || ||||| || ||| ||||| ||||| Sbjct 35251 GCCATGGCACGCAGATGTCTTCTCCTTCTTGGATCTCCGCAAGAACCACGGAAAGGAGGA 35192 Query 363921 ATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGT 363980 | ||||| || ||||||||||| | || ||||| | || | || |||||||| || Sbjct 35191 GGTTCGTGCTCGCGATCTGTTCTACGGTCTGTGGGTCCCAGATCTCTTCATGAAGCGTGT 35132 Query 363981 GGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGT 364040 ||| | || | ||| | | | ||||| ||||| || || ||||| | ||||| Sbjct 35131 TGAGCAAAATACCACCTGGACTTTGATGTGCCCTCACGAGTGCCCCGGTCTGGCTGATGT 35072 Query 364041 ATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAA 364100 | || | || | | | || ||||| || || ||||| |||| |||| | Sbjct 35071 CTACGGCGCTGAGTTCGAGGAGCTGTACGAGCGATACGAGCGTGAGGGCAAGGGTCGTGA 35012 Query 364101 GACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAAC 364160 ||| | | ||| |||||||| |||| ||||||| | || | || | ||||| || || Sbjct 35011 GACCGTCCGCGCTCAGAAGCTCTGGTATGCCATCCTCGAGGCTCAAACCGAGACCGGTAC 34952 Query 364161 ACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTAC 364220 || || || | ||||| || | |||| ||||| ||||||| || || | || || Sbjct 34951 CCCATACATCCTCTACAAGGACGCTGCCAACAGCAAGAGCAACCAGAAGAACTTGGGAAC 34892 Query 364221 AATTCAGCAG-AGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTG 364279 | || |||| ||| || || ||||||||||| || ||||| ||||| |||||| | Sbjct 34891 CA-TCCGCAGCTCCAATCTCTGCACCGAGATTATCGAGTACACTGCTCCTGACGAGGTCG 34833 Query 364280 CCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAAAAGATG-GTAC-----TT 364333 |||| || |||||||| || |||| || || | | || | || | || || Sbjct 34832 CCGTGTGCAACCTTGCATCTCTCGCCCTGCCCACATACGTCGACATTGAGAACGAGCGTT 34773 Query 364334 TTGACCACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATCTCGACAAGGTTA 364393 | ||| | || | || | | || ||| | | || || | ||||| | | Sbjct 34772 TCGACTTCGAGAAGCTCCACCAGGTCACCCAGACCGTCACCAAGAACTTGAACAAGATCA 34713 Query 364394 TCGACAAGAATTATTATCCAATTCCTGAAGC-CGAGCGTTCTAATATGCGTCATCGCCCG 364452 |||| || | || || | || ||||| || | | || | ||||| || || Sbjct 34712 TCGAGGTCAACCACTACCCCGTGCCAGAAGCTCGCAAGAGC-AACTTCCGTCACCGTCCC 34654 Query 364453 ATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAAGATGGCATTTGAT 364512 || ||||||||||| | || || ||||| | ||| || || ||| | ||||| Sbjct 34653 ATCGGTCTTGGTGTCAACGGTCTTGCTGATGCTTTCTTGGCTCTGCGCATGCCTTTTGAC 34594 Query 364513 TCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATG 364572 || ||||| ||||| || || | ||||||| || || || || || || | Sbjct 34593 TCTCCTGAGGCTCGCCAGCTCAACATCCAGATCTTCGAGACCATCTACCACGCTGCTCTC 34534 Query 364573 ACTGCTTCGTGTGATTTGGCAAAAACCAAG---GGAAAGTACTCTACTTATGAGGGGTCC 364629 || || || || ||| | || ||||| ||| ||| || || ||||||||| Sbjct 34533 ACCGCCTCATGCGATCTCGC---TGCCAAGCTTGGACCATACGAGACATACGAGGGGTCC 34477 Query 364630 CCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGG 364689 || | || |||| | |||| | || | ||| ||| || || ||| | ||| Sbjct 34476 CCCGTCTCCAAGGGCGAGCTCCAATACGACATGTGGGGTGTGACTCCTACTGATCTCTGG 34417 Query 364690 AACTGGGATACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGCAACTCCCTCGTTACA 364749 |||||| | || |||| | |||||||| |||||||| ||| | Sbjct 34416 GACTGGGCCGCACTCAAGGCCAAGATCGCCGAGCATGGTGTCCGCAACTCGCTCCTCGTC 34357 Query 364750 GCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCG 364809 || |||||||| || || || || | |||||| | || ||||||||| ||||| || Sbjct 34356 GCTCCCATGCCAACTGCGTCCACCTCGCAGATCATGGGCTTCAACGAGTGTTTCGAGCCA 34297 Query 364810 TTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAG 364869 | || ||||| | || || || || || || | || || || | ||| || || | Sbjct 34296 TACACCAGCAACATCTACTCCCGTCGTGTGCTCGCTGGTGAGTTCCAGGTTGTCAACCCG 34237 Query 364870 TACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATATC 364929 | | | ||||| | ||| || || || ||| |||| |||||||||| ||| Sbjct 34236 TGGTTGCTGAAGGACTTGGTCGAGCGTGGCCTCTGGTCAGACAACATGAAGAACCGCATC 34177 Query 364930 ATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAAGCCTATT 364989 ||||||| | |||||| | ||| ||||||| | || || || || ||| || | Sbjct 34176 ATCGCCGATGGTGGTTCCATCCAGCGCATTCCAAACATCCCCGATGACCTCAAGGCTCTG 34117 Query 364990 TACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCGATCGCGGT 365049 ||||| ||||| ||||| || | ||| || || | ||| | || || || ||| Sbjct 34116 TACAAGACCGTCTGGGAGATCAGCCAGCGCCACATCGTTCAGATGTCCGCTGACCGTGGT 34057 Query 365050 GCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCCAACCTCCGCCAAG 365109 ||||| ||| |||| ||| | ||| | ||||| |||| ||| | ||| Sbjct 34056 GCTTTCATCGATCAGTCTCAGAGCCTGAACATCCACATGAAGGAGCCCACCATGGGCAAA 33997 Query 365110 CTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156 | || |||||| ||| ||| ||||| ||| || ||||| || Sbjct 33996 ATCACCAGCATGCACTTCGCCGGCTGGAAGCTCGGCCTGAAGACTGG 33950 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303238458891890