Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zymoseptoria_20brevis_20[genbank_20GCA_5F000983655.1_202015-04-30] 6,895 sequences; 36,104,098 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq3059 145 5e-30 seq1789 98.7 7e-16 >seq3059 Length=93957 Score = 145 bits (160), Expect = 5e-30 Identities = 208/293 (71%), Gaps = 0/293 (0%) Strand=Plus/Plus Query 6194 GGACGCGTTCTACCGCTACAAAATGCCGCGCATCTGCGCCAAGGTCGAGGGTAAGGGAAA 6253 |||| | |||||||||||||| ||| ||||||| |||||||||| || ||||| || Sbjct 69530 GGACCCTTTCTACCGCTACAAGATGGAGCGCATCCAGTCCAAGGTCGAAGGAAAGGGTAA 69589 Query 6254 CGGTATTAAAACCGTCATTGTCAACATGCCTGAAGTCGCTAAGGCGCTCGGACGCCCTGC 6313 ||| || || |||||||| |||||| || | |||||| || ||||| ||||| | Sbjct 69590 CGGCATCAAGACCGTCATCGTCAACCTGAGCAACGTCGCTCAGCAGCTCGCCCGCCCACC 69649 Query 6314 CACCTACCCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCACAA 6373 | |||| || || || || || | ||| || || |||||||| | | |||| ||| Sbjct 69650 AAACTACGTGATCAAGTACTTTGGCTTCGAGCTGGGTGCTCAGACAAACATCGATCCCAA 69709 Query 6374 AAACGAGCGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACTTGA 6433 | || |||| ||| | ||||| | || | | |||||| ||||||| || || Sbjct 69710 GGATGACCGCTGGATCATCAACGGCGCTCACGAAGCAAGCAAGCTTCAGGACTACCTCGA 69769 Query 6434 CGGCTTTATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGACCG 6486 ||||| || |||||||||||| || || ||| | ||||| ||||||| Sbjct 69770 TGGCTTCATCAACAAGTTTGTGCTCTGCAAAGAGTGCAAGAACCCTGAGACCG 69822 >seq1789 Length=118145 Score = 98.7 bits (108), Expect = 7e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 || || | || ||| | |||||| || || ||||||||||| ||||| ||||||||||| Sbjct 19260 CCTCCACGCAGACGGAGCACCAAGTGCAGGGTGCTCTCCTTCTGAATGTTGTAATCAGAA 19319 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 | || |||| || | || || ||||| || || ||||| |||||||| | ||| Sbjct 19320 AGTGTCCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATGAGGCGCTGTTGATCCGGTGGG 19379 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270 | || || ||||| ||| || |||||| || | || || ||| || ||| Sbjct 19380 ATACCCTCCTTGTCTTGAATCTTCGACTTCACGTTGTCGATTGTGTCTGATGACTCCACT 19439 Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 || | ||| ||||| || || || | || || ||||| || ||||| Sbjct 19440 TCGAGTGTGATAGTCTTGCCGGTGAGTGTCTTGACGAAGATTTGCAT 19486 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334919053444745