Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zymoseptoria_20brevis_20[genbank_20GCA_5F000983655.1_202015-04-30] 6,895 sequences; 36,104,098 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq1700 149 7e-31 >seq1700 Length=96718 Score = 149 bits (164), Expect = 7e-31 Identities = 457/696 (66%), Gaps = 13/696 (2%) Strand=Plus/Plus Query 92966 TTCATTCCTAGAAGACGTACA-GGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACAAC 93024 |||||||| || || || ||| || || ||||| || | ||| || | |||||| || || Sbjct 69343 TTCATTCCGAGGAG-CGCACATGGGAGGGCGTCTGTGAGGAACTCCTGCTCGATGACGAC 69401 Query 93025 GGCTTCTTTCAAGATTTCTATTACTCTACTA--TTTGGTGGTTT-TTGTACGACATAATT 93081 || || | | ||| ||| || ||| |||| ||| || |||| || | | Sbjct 69402 AGCCTCGGTGATGATGTCTTCAACG--ACTTGGTTTGATGGCTTGTTGTT-GAGGTGAGA 69458 Query 93082 GTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCT 93141 | ||| | ||| ||||||||||| || | || ||||| || || || | ||| ||| Sbjct 69459 GAACAGCAGGCAGGCAAAGTCGGTGTGCATGCCCTCGTCACGGGAGATGAGCTCGTTGGA 69518 Query 93142 GAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACC 93201 ||| || | || || | || || || ||||| | ||| || || || || ||| || Sbjct 69519 GAAGGTGAGGCCGGGCATGAGACCACGCTTCTTCAACCAGAAGATCGATGCGAAAGATCC 69578 Query 93202 AGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGA 93261 || || || ||||| || | ||| ||||| || | | ||| |||||| | | | Sbjct 69579 GGAGAAGAAGATACCCTCAATGGCGGCAAAGGCGATGAGACGGCAGGCAAAGGTGGAGTT 69638 Query 93262 ATTACTGCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTT-T 93320 || | |||||| | ||||| || || || || || || || | |||| | Sbjct 69639 CTTGTCGGAGATCCACCGCAGCGCCCAGTCAGCCTTCTTACGGATGCATGGGA-TGTTGT 69697 Query 93321 CGATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACA 93380 |||| ||||| || ||||| || | | | || | |||||||| ||||| | | Sbjct 69698 CGATGGCGTTGAAGAGGTACGTGCGTTGCTTGGGCTCGCTGATGTATGTGTCGATGAGGA 69757 Query 93381 GAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAG 93440 | || || | || || |||| |||||||| || ||||| |||||||| || | | Sbjct 69758 GGGAGTATGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAGCGGG 69817 Query 93441 CTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCAT 93500 | || | ||| ||||||||| || | ||| | ||| || || ||||| || |||| Sbjct 69818 CCTCGGGGATTTGCACTTCTCCGCTGAAGCGCTCGATGAGGTTCTCGTTGACGATGCCAT 69877 Query 93501 CGGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTT---AA 93557 | || || || || || |||| | || || || ||| || || || | Sbjct 69878 CCGAAGCAGCGAAGAAGGCCAGGACGTGGGAGATGAAGAAGCGCTCGTCGTCGTTGAGAC 69937 Query 93558 GCTTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATG 93617 |||| | ||| ||| ||||| || || ||||||| || ||| | ||||| || || | Sbjct 69938 GCTTGTTCCAGTCGTGAAGATCCTTGGAGAGATCGATCTCCTCGGCGGTCCAGAAGGAGG 69997 Query 93618 CTTCTGCTTTTTTGTACATATCCCATATGTCTTGAT 93653 | || || ||||||||||| | ||| || | ||||| Sbjct 69998 CCTCGGCCTTTTTGTACATTTGCCAGATCTGTTGAT 70033 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556812805559800