Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zymoseptoria_20brevis_20[genbank_20GCA_5F000983655.1_202015-04-30] 6,895 sequences; 36,104,098 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq1789 98.7 8e-16 seq1447 84.2 2e-11 >seq1789 Length=118145 Score = 98.7 bits (108), Expect = 8e-16 Identities = 104/137 (76%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | || || || || | || || || || ||||||||||| ||| Sbjct 19713 ATACCACCACGGAGGCGCAGCACCAAGTGGAGAGTGGACTCCTTCTGAATGTTGTAGTCG 19772 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || | || || ||| ||||| || || || ||| ||||||||||||| ||||| ||| Sbjct 19773 CTGAGGGTGCGCCCATCCTCAAGCTGCTTTCCCGCGAAGATGAGACGCTGCTGGTCTGGA 19832 Query 114273 GGAATGCCTTCTTTGTC 114289 |||||||| || ||||| Sbjct 19833 GGAATGCCCTCCTTGTC 19849 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | | || | ||| | ||| || || || || |||||||| || Sbjct 19485 ATACCACCACGAAGGCGGAGGACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCC 19544 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | || || || || ||||| || || ||| |||| | ||||||||||| || Sbjct 19545 GAGAGCGTGCGGCCGTCCTCGAGTTGCTTGCCGGCGAAGATCAATCGCTGTTGGTCTGGG 19604 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 |||||||| || ||||| ||||| || | | || | |||||| | || || Sbjct 19605 GGAATGCCCTCCTTGTCCTGGATCTTAGACTTGACGTTGTCGATGGTGTCCGAAGACTCC 19664 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| ||| | ||| ||||| || ||||| || || || |||||||| Sbjct 19665 ACCTCCAAGGTGATCGTCTTGCCAGTGAGAGTCTTGACGAAGATCTGCAT 19714 >seq1447 Length=163572 Score = 84.2 bits (92), Expect = 2e-11 Identities = 138/198 (70%), Gaps = 1/198 (1%) Strand=Plus/Plus Query 114195 TTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATG 114254 || || |||||||| ||||||| ||| || ||| || ||||| || || ||| |||| Sbjct 89043 TTCTGGATGTTGTAGTCGCTCAAAGTTCGGCCATCCTCGAGTTGCTTTCCGGCGAAGATC 89102 Query 114255 AGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCA 114314 | |||||||||||||| || || || || || || ||||| || | | || Sbjct 89103 AATCGCTGTTGGTCCGGTGGGATTCCCTCCTTATCCTGGATCTTGCTCTTGACGTTGTCG 89162 Query 114315 ACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAA 114374 | |||||||| || || || || | ||| | || ||||| || || || || || ||| Sbjct 89163 ATGGTGTCGGACGACTCCACCTCGAGGGTGATAGTCTTGCCCGTGAGGGTCTTCACGAAA 89222 Query 114375 ATCTGCATGGCTTAATTA 114392 | | |||| ||| |||| Sbjct 89223 CTGT-CATGACTTCATTA 89239 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420099094924740