Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zymoseptoria_20brevis_20[genbank_20GCA_5F000983655.1_202015-04-30] 6,895 sequences; 36,104,098 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq5820 104 2e-17 >seq5820 Length=46620 Score = 104 bits (114), Expect = 2e-17 Identities = 200/291 (69%), Gaps = 3/291 (1%) Strand=Plus/Minus Query 20372 AACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGCCGGGTTCCACGCACACATA 20431 |||| |||||| || || || |||||| | || ||| || ||||||||||||| | | Sbjct 18031 AACATGTGACACGGGGGTAGTGCCATCTTCTTCATGTCTGCTGGGTTCCACGCACTGAGA 17972 Query 20432 ATGATTCTTCTATCGTGCGGATTATTTTTTAT-TAAATCCACAATGTACGACAATTGGTC 20490 ||||| | | ||||| |||||| | | | | || || | | | | |||||| Sbjct 17971 ATGATGCGACGATCGTACGGATTCTCTCGCAACTTTCTCAGCACT-TCTGCGAGTTGGTC 17913 Query 20491 AAACCCCTGGCCTGTATAGTCAGCATCCGCGTCCACGTACGCCGCCCCAAAGTGCCTCCA 20550 | |||| ||||||||||| |||| ||| ||||| | || || || |||| ||| Sbjct 17912 CACGCCCTTTCCTGTATAGTCCGCATGGCAGTCTTCGTACTCGGCTCCGAAATGCCGCCA 17853 Query 20551 CTGGAAACCGTAAACAGGTCCCAAATCCCCCTCCCTTCTGTGCGCCAGGCCGCGCCCGGC 20610 || || || || ||||| |||||||| ||||| |||||| | || || | | | Sbjct 17852 TTGAAAGCCATACACAGGACCCAAATCTCCCTCTTCTCTGTGTCCAAGTCCTACGCTGTC 17793 Query 20611 CAGGAACTCCCTGGAGCCATTTTTGTCCCATATCTTGAC-TCCTGTTCTTG 20660 || | | || || ||||||||| |||||| || | || | ||| ||||| Sbjct 17792 CAAGTATTCTCTTGAGCCATTTCCGTCCCAGATATGCACGTTCTGGTCTTG 17742 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441334759181800