Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zymoseptoria_20brevis_20[genbank_20GCA_5F000983655.1_202015-04-30] 6,895 sequences; 36,104,098 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq1700 132 1e-25 >seq1700 Length=96718 Score = 132 bits (146), Expect = 1e-25 Identities = 294/441 (67%), Gaps = 0/441 (0%) Strand=Plus/Minus Query 243298 CGTCTCGTCGCCTGGGTGTGCGTTGAAGGTATTCTGTTTTCCGGGAGTTTCTGCGCCATC 243357 |||||| |||||| | | |||| ||||| | || ||||| |||| | ||| Sbjct 69620 CGTCTCATCGCCTTTGCCGCCATTGAGGGTATCTTCTTCTCCGGATCTTTCGCATCGATC 69561 Query 243358 TTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAACGAGTTCATCAGT 243417 || ||| || ||| ||| | ||||| |||||| | || |||||| ||||| Sbjct 69560 TTCTGGTTGAAGAAGCGTGGTCTCATGCCCGGCCTCACCTTCTCCAACGAGCTCATCTCC 69501 Query 243418 CGCGACGAGGGCCTTCACCAACAGTTCGGTGAGCTTATGTATTCAAAGCTCCAGAACAAG 243477 || ||||||||| | ||| | || | || ||| || | ||| | |||||| Sbjct 69500 CGTGACGAGGGCATGCACACCGACTTTGCCTGCCTGCTGTTCTCTCACCTCAACAACAAG 69441 Query 243478 CTACCATTCGAAACGGTCAAACAAATCATCACAGAAGCAGTTGAAAACGAAAAGGAATTC 243537 | | || | || || || | |||||||| || || || | | ||| |||| ||| Sbjct 69440 CCATCAAACCAAGTCGTTGAAGACATCATCACCGAGGCTGTCGTCATCGAGCAGGAGTTC 69381 Query 243538 ATTTGCGACGCTATTCCATGCCGGCTTATTGGCATGAACTCTGAACTCATGGGACAGTAC 243597 | ||||| | ||||| ||| | || |||||| | | |||||| | || ||| Sbjct 69380 CTCACAGACGCCCTCCCATGTGCGCTCCTCGGAATGAACGCCAAGCTCATGTGCCAATAC 69321 Query 243598 ATCGAATTCGTAGCCGACCGCATTTTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCC 243657 ||||| ||||| |||||||| | || | || || || | |||| |||||| | Sbjct 69320 ATCGAGTTCGTCGCCGACCGTCTCCTCCTGGCACTCGGCAACCAGAAGCACTACAACGCT 69261 Query 243658 AAGAACCCCTTTGCCTTTATGGAGCTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAA 243717 | |||||||| | ||| |||||| ||| || || ||| || || ||||||||||| Sbjct 69260 ACCAACCCCTTCGACTTCATGGAGAACATCTCCCTCGGAGGCAAGACCAACTTCTTCGAG 69201 Query 243718 AAGCGTGTCAGTGATTATCAA 243738 ||||||||| ||||||| ||| Sbjct 69200 AAGCGTGTCGGTGATTACCAA 69180 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102782569168250