Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zymoseptoria_20brevis_20[genbank_20GCA_5F000983655.1_202015-04-30] 6,895 sequences; 36,104,098 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq3840 279 5e-70 >seq3840 Length=90666 Score = 279 bits (308), Expect = 5e-70 Identities = 633/945 (67%), Gaps = 8/945 (1%) Strand=Plus/Minus Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774 || ||| | ||||||| ||||| || ||||||| ||| ||||| | | ||| | ||| Sbjct 35733 AACTACCAATACTTTGGATTCAAGACGCTGGAGAGGTCATACCTTTTGAGGATCAACGGC 35674 Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834 | |||| ||||| |||| || ||| || | ||||| || ||| |||| || |||||| | Sbjct 35673 AAGGTTGCCGAGAGACCACAACAGATGATCATGCGTGTGGCCGTCGGCATCCACGGCGAG 35614 Query 93835 GACATGCCGAAT--GTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATAC-CATG 93891 ||||| ||| | | | | | | || ||||| | ||||| | || |||| Sbjct 35613 GACAT--CGAGTCCGCCATTGAGACCTACAACTACATGTCGAACAAGTACTTCACACATG 35556 Query 93892 GCCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTG 93951 | | || || ||||||| ||| || || || | || || | || || ||||| Sbjct 35555 -CGTCGCCTACGCTGTTCAGCGCTGGAACACCCAACGCTCAACTGGCATCCTGCTTCCTC 35497 Query 93952 AT-GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGAC 94010 || ||| | || | ||| ||| || || | ||||| | ||| ||| || | Sbjct 35496 ATCGAC-ATGAAAGATGACAGCATTGATGGGATCTACGACACATTAAAGACCTGCGCCAT 35438 Query 94011 CATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTC 94070 ||||| || |||| || || || ||| ||| |||||| | || || | || | Sbjct 35437 GATCTCCAAGAACGCCGGAGGCATTGGGCTCAACGTCCACAGAATTCGCGCAACCGGAGC 35378 Query 94071 CTACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAA 94130 |||||| |||| ||||| || || |||||||| ||||| || ||||| || || || || Sbjct 35377 ATACATCAGCGGCACCAACGGAACATCCAACGGTCTCGTACCCATGCTGCGTGTGTTTAA 35318 Query 94131 CAACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTA 94190 |||| | || |||||||| |||||||| || | | | ||| |||| || | || Sbjct 35317 CAACACCGCTCGCTACGTCGACCAGGGCGGCAACAAGCGACCTGGTGCTTTTGCCATGTA 35258 Query 94191 TCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAA 94250 ||||||| |||||||| || || | ||| | || || || ||||||||||| || Sbjct 35257 CATCGAGCCATGGCACGCAGATGTCTTCTCCTTCTTGGATCTCCGCAAGAACCACGGAAA 35198 Query 94251 CGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAA 94310 || || | || | || || ||||||| ||| ||||| ||||| || || ||||| Sbjct 35197 GGAGGAGGTTCGTGCTCGCGATCTGTTCTACGGTCTGTGGGTCCCAGATCTCTTCATGAA 35138 Query 94311 ACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTC 94370 || || ||| |||| || |||||| | | | || || | || || ||||| ||| | Sbjct 35137 GCGTGTTGAGCAAAATACCACCTGGACTTTGATGTGCCCTCACGAGTGCCCCGGTCTGGC 35078 Query 94371 CGACGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGC 94430 || || | || | || || || |||| | || ||||| ||||||||| Sbjct 35077 TGATGTCTACGGCGCTGAGTTCGAGGAGCTGTACGAGCGATACGAGCGTGAGGGCAAGGG 35018 Query 94431 CAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGAC 94490 | || | ||| |||||| ||| || ||| | || | || ||||| Sbjct 35017 TCGTGAGACCGTCCGCGCTCAGAAGCTCTGGTATGCCATCCTCGAGGCTCAAACCGAGAC 34958 Query 94491 GGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCT 94550 ||||| || |||||| | | ||||||| ||| |||| |||| ||||||| || || | Sbjct 34957 CGGTACCCCATACATCCTCTACAAGGACGCTGCCAACAGCAAGAGCAACCAGAAGAACTT 34898 Query 94551 CGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGA 94610 || ||| ||||| ||||| |||||||||||| ||||||| ||| |||| ||||| Sbjct 34897 GGGAACCATCCGCAGCTCCAATCTCTGCACCGAGATTATCGAGTACACTGCTCCTGACGA 34838 Query 94611 GATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGT 94655 | | || ||||| ||||| | || || |||| |||| | ||| Sbjct 34837 GGTCGCCGTGTGCAACCTTGCATCTCTCGCCCTGCCCACATACGT 34793 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494680561044200