Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zymoseptoria_20brevis_20[genbank_20GCA_5F000983655.1_202015-04-30] 6,895 sequences; 36,104,098 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq1700 176 6e-39 seq3840 163 3e-35 >seq1700 Length=96718 Score = 176 bits (194), Expect = 6e-39 Identities = 544/824 (66%), Gaps = 37/824 (4%) Strand=Plus/Plus Query 127231 GTAGTCCCCGACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATTCTCCAT 127290 ||| || ||||| ||||||||||||||||| ||||| || ||||| ||| |||||||| Sbjct 69183 GTAATCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCTCCGAGGGAGATGTTCTCCAT 69242 Query 127291 AAAATCAAATGGGTTCTTTGAGTTCCAAATTGT-TGGCACCCCAAT--CTGTTTGAGGAG 127347 || || || ||||| | | ||| | | ||| || | | | | |||||| Sbjct 69243 GAAGTCGAAGGGGTTGGTAGCGTTGTAGTGCTTCTGGTTGCCGAGTGCCAG---GAGGAG 69299 Query 127348 ACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTT 127407 ||| || | |||| |||| ||||| | |||| || | |||||| |||| ||| Sbjct 69300 ACGGTCGGCGACGAACTCGATGTATTGGCACATGAGCTTGGCGTTCATTCCGAGGAGCGC 69359 Query 127408 ACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGTACGATGGC 127467 ||||||||| ||||| || |||| ||| ||| ||| | ||||| || | |||| | Sbjct 69360 ACATGGGAGGGCGTCTGTGAGGAACTCCTGCTCGATGACGACAGCCTCGGTGATGATGTC 69419 Query 127468 GTGAATAGTGTCCACCCCAGGTCT-ATTGCGTAAAGTCTTGA----AGAGTTCCACAG-- 127520 | || | || ||| | || || | || ||| |||| | ||| Sbjct 69420 TTCAA------CGACTT--GGTTTGATGGCTTGTTGT--TGAGGTGAGAGAACAGCAGGC 69469 Query 127521 ---CAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGAC 127577 |||| || ||| | |||||||||||||||||||| || || |||||| || | Sbjct 69470 AGGCAAAGTCGGTGTGCATGCCCTCGTCACGGGAGATGAGCTCGTTGGAGAAGGTGAGGC 69529 Query 127578 CTGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGA 127637 | ||||||||||| ||||||||||||||||| |||| || || || |||||||||| Sbjct 69530 CGGGCATGAGACCACGCTTCTTCAACCAGAAGATCGATGCGAAAGATCCGGAGAAGAAGA 69589 Query 127638 TCCCCTCCACACACGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGTATCA- 127696 | ||||| | || || || | ||||| |||||||| | | | |||| | Sbjct 69590 TACCCTCAATGGCGGCAAAGGCGATGAGACGGCAGGCAAAGGTG-GAGTTCTTGTCGGAG 69648 Query 127697 AACCACTTCATCGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCA 127756 | |||| || |||||| | ||||| || ||| ||||||| | | | ||| || | Sbjct 69649 ATCCACCGCAGCGCCCAGTCAGCCTTCTTACGGATGCATGGGATGTTGTCGATGGCGTTG 69708 Query 127757 AAGA-GTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGT 127815 |||| || | | | || || || || ||||||| | || ||||| || ||||| Sbjct 69709 AAGAGGTACGTGCGTTGCT-TGGGCTCGCTGATGTATGTGTCGATGAGGAGGGAGTATGT 69767 Query 127816 TTCGCCGTGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTA 127874 ||| ||||| | | ||| || | ||| | ||||||| |||| || ||| | Sbjct 69768 CTCGGAGTGGATGTTCTCCATCAT-GATCTGGAAGCCGTAGAAGCAGCGGGCCTCGGGGA 69826 Query 127875 TCTGTACCTCATCGGCAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACCCA 127933 | || || || || || || | | ||| ||||| || || ||||| || || Sbjct 69827 TTTGCACTTC-TCCGCTGAAGCGCTCGATGAGGTTCTCGTTGACGATGCCATCCGAAGCA 69885 Query 127934 GCAAAAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTC 127990 || || || ||||||| | ||||| | || | ||||| | | | ||| Sbjct 69886 GCGAAGAAGGCCAGGACGTGGGAGATGAAGAAGCGCTCGTCGTCGTTGAGACGCTTGTTC 69945 Query 127991 CAGTCGTCGAGATCCTTTGAGAGATCTACCTCCTCCGCAGTCCA 128034 ||||||| |||||||| |||||||| | |||||| || ||||| Sbjct 69946 CAGTCGTGAAGATCCTTGGAGAGATCGATCTCCTCGGCGGTCCA 69989 >seq3840 Length=90666 Score = 163 bits (180), Expect = 3e-35 Identities = 1162/1843 (63%), Gaps = 45/1843 (2%) Strand=Plus/Plus Query 115526 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 115585 ||||||||||||| | | ||| | | || ||||||||||| || ||||| || | Sbjct 33903 TGAACTGAATGGGCGCAGACGCCGCCATGGTGCGAAGGTAGTACATGCCAGTCTTCAGGC 33962 Query 115586 CCTGCTTCCAGGCATACATATGCATTGAGGACAACTTGGAGAGTGTTGGACTT-TCCATG 115644 | |||||||| | | ||||| || | ||| | || ||| || | |||| Sbjct 33963 CGAGCTTCCAGCCGGCGAAGTGCATGCTGGTGATTTTGCCCA-TGGTGGGCTCCTTCATG 34021 Query 115645 AAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCATATCAATC 115704 || ||||| || || || ||||||||||| || || || || | ||| | || Sbjct 34022 TGGATGTTCAGGCTCTGAGACTGATCGATGAAAGCACCACGGTCAGCGGACATCTGAACG 34081 Query 115705 ACATCCTTCATCTTGATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGGATA 115764 | | | |||| ||||| || || |||| || ||| | ||||| ||||| Sbjct 34082 ATGTGGCGCTGGCTGATCTCCCAGACGGTCTTGTACAGAGCCTTGAGGTCATCGGGGATG 34141 Query 115765 TCCACGATATTTTGGATAGAGCCACCTGCCTTGACCATGAGATCCTTCATATCCTTTGAC 115824 | || ||||| || ||||| | || ||| | | |||||| | | |||| Sbjct 34142 TTTGGAATGCGCTGGATGGAACCACCATCGGCGATGATGCGGTTCTTCATGTTGTCTGAC 34201 Query 115825 CAGAGACCAATCTTCTTGAGATCCTCCACGAGGTGCTTATTGACAACAACAAACTCACCC 115884 ||||| ||| || | |||| || | | |||||||| |||||||| Sbjct 34202 CAGAGGCCACGCTCGACCAAGTCCTTCAGCAACCACGGGTTGACAACCTGGAACTCACCA 34261 Query 115885 GCGAGGGTGCGTCTCAGATAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCC 115944 ||||| || | ||||||||| | ||||||||||| || ||||| ||| ||| Sbjct 34262 GCGAGCACACGACGGGAGTAGATGTTGCTGGTGTATGGCTCGAAACACTCGTTGAAGCCC 34321 Query 115945 AAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCC 116004 | ||| || | ||||| || || |||||||| || | ||| || |||||||| ||| Sbjct 34322 ATGATCTGCGAGGTGGACGCAGTTGGCATGGGAGCGACGAGGAGCGAGTTGCGGACACCA 34381 Query 116005 ACCCCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAGTTGAGCTTT--GTCTCCCCCT 116062 | | || ||||||| ||| ||||||| || || | | | || | | Sbjct 34382 TGCTCGGCGATCTTGGCCTTGAGTGCGGCCCAGTCCCAGA-GATCAGTAGGAGTCACAC- 34439 Query 116063 CCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATG 116122 ||||||| || | ||||| || | ||| | || || ||||| ||||||| |||| Sbjct 34440 CCCACATGTCGTATTGGAGCTCGCCCTTGGAGACGGGGGACCCCTCGTATGTCTCGTATG 34499 Query 116123 GGCCCTCAACCT---CCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCT 116179 | || || || | || | ||| | || ||| || ||||| || || |||| Sbjct 34500 GTCC---AAGCTTGGCAGCGAGATCGCATGAGGCGGTGAGAGCAGCGTGGTAGATGGTCT 34556 Query 116180 CAAAAATGCGAGCATTCAT-TGCCTTGGCCTCGTCGGAATCAAACGCGAGACGGCACAA- 116237 | || || | || | || | | |||| || ||||| | | || || | Sbjct 34557 CGAAGATCTGGATGTTGAGCTGGCGAG-CCTCAGGAGAGTCAAAAGGCATGCG-CAGAGC 34614 Query 116238 -AATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAG 116296 || ||| |||| || ||||| | |||||| || || || || || || | | || Sbjct 34615 CAAGAAAG-CATCAGCAAGACCGTTGACACCAAGACCGATGGGACGGTGACGGAAGTTGC 34673 Query 116297 ACTTTCGAGCGGTCTC-CACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTG 116355 ||| ||||| ||| |||||| || || ||||| | | | || | || ||| Sbjct 34674 TCTTGCGAGCT-TCTGGCACGGGGTAGTGGTTGACCTCGATGATCTTGTTCAAGTTCTTG 34732 Query 116356 GTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGT-CTCTTCATT 116414 ||||| || |||| | || ||||| ||| | || |||| || || ||| | Sbjct 34733 GTGACGGTCTGGGTGACCTGGTGGAGCTTCTCGAAGTCGAAAC-GCTCGTTCTCAATGTC 34791 Query 116415 GACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGT 116474 ||| || | || ||||||| || || || || ||||| | | ||| || | |||| Sbjct 34792 GACGTATGTGGGCAGGGCGAGAGATGCAAGGTTGCACACGGCGACCTCGTCAGGAGCAGT 34851 Query 116475 GTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATT 116534 |||||| ||||| || || || | ||| || || ||||| ||||||||||| || || Sbjct 34852 GTACTCGATAATCTCGGTGCAGAGATTGGAGCTGCGGATGGTTCCCAAGTTCTTCTGGTT 34911 Query 116535 TGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGA 116594 ||| |||| || ||||||||||| || ||||| || || ||||| ||||| | Sbjct 34912 GCTCTTGCTGTTGGCAGCGTCCTTGTAGAGGATGTATGGGGTACCGGTCTCGGTTTGAGC 34971 Query 116595 CTTGAGAATAGCCTTCCATACATCGGCGGCTG-GCACAGTGGCGTTGGCTCGCCCCT--- 116650 || ||| || || | ||| | || ||| || | | || | | || |||| Sbjct 34972 CTCGAGGATGGCATACCAGA-----GCTTCTGAGCGC--GGACGGTCTCACGACCCTTGC 35024 Query 116651 CCTC---CTCGTACTTTGTGTAGAGGGCCTCAAACTCTTCACCCACAGCCTCTGAGAGCC 116707 |||| |||||| ||| || |||| ||||| | || | || | || | Sbjct 35025 CCTCACGCTCGTATCGCTCGTACAGCTCCTCGAACTCAGCGCCGTAGACATCAGCCAGAC 35084 Query 116708 CTGGTGCCTTATCTGGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGA 116767 | || || | || || | | || ||| | | |||||| |||||||||| Sbjct 35085 CGGGGCACTCGTGAGGGCACATCAAAGTCCAGGTGGTATTTTGCTCAACACGCTTCATGA 35144 Query 116768 AGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCT 116827 |||| ||||||| ||| || | |||| ||||| ||| ||| | || || | || | Sbjct 35145 AGAGATCTGGGACCCACAGACCGTAGAACAGATCGCGAGCACGAACCTCCTCCTTTCCGT 35204 Query 116828 GATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCG 116887 | || || | ||||| ||| | || ||| |||||||| || || | ||||| | Sbjct 35205 GGTTCTTGCGGAGATCCAAGAAGGAGAAGACATCTGCGTGCCATGGCTCGATGTACATGG 35264 Query 116888 CGATTG-ACC-CCTTGC--GACGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAAT 116943 | | | ||| | || | | || |||||| || || | || || |||||| Sbjct 35265 CAAAAGCACCAGGTCGCTTGTTG-CCGCCCTGGTCGACGTAGCGAGCGGTGTTGTTAAAC 35323 Query 116944 ACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTG 117003 || || ||||| || | || ||| | ||| || || || || | || | | Sbjct 35324 ACACGCAGCATGGGTACGAGACCGTTGGATGTTCCGTTGGTGCCGCTGATGTATGCTCCG 35383 Query 117004 TTGGCTCTGACATC-GTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGC 117062 | || | || || ||||| || | ||||| || || || ||| ||||| || Sbjct 35384 GTTGCGC-GAATTCTGTGGACGTTGAGCCCAATGCCTCCGGCGTTCTTGGAGATCATGGC 35442 Query 117063 GCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAA 117122 ||| | | | || ||||||||||||| || |||| | || | |||||||||| Sbjct 35443 GCAGGTCTTTAATGTGTCGTAGATCCCATCAATGCTGTCATCTTTCATGTCGATGAGGAA 35502 Query 117123 GCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGAT 117182 |||| | || ||| | | ||||| |||||| |||| || || || | ||| || | Sbjct 35503 GCAGGATGCCAGTTGAGCGTTGGGTGTTCCAGCGCTGAACAGCGTAGGCGACGCATGTGT 35562 Query 117183 GAACATACCT-TGGGACATCTTATCGTAGGTCTCCAAGACAGAGGGAATGTCTTCCCCGT 117241 ||| ||| | | ||||| | | ||||||||| | | | || ||||| || |||| Sbjct 35563 GAA-GTACTTGTTCGACATGTAGTTGTAGGTCTCAATGGCGGACTCGATGTCCTCGCCGT 35621 Query 117242 GAATACCGATTGAGACCCGCATAAACATGTATTGGGGTGTTTCCATCAGGATACCATCGA 117301 | || |||| | || ||||| | ||| | ||| ||| | || | | || | || Sbjct 35622 GGATGCCGACGGCCACACGCATGATCATCTGTTGTGGTCTCTCGGCAACCTTGCCGTTGA 35681 Query 117302 GCCTCTGGAGGTAACTCTTCTCCAAGGTCTTGAGACCAAAATA 117344 |||| ||||| | |||||| ||||||| ||||| || Sbjct 35682 TCCTCAAAAGGTATGACCTCTCCAGCGTCTTGAATCCAAAGTA 35724 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613454323348200