Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zymoseptoria_20brevis_20[genbank_20GCA_5F000983655.1_202015-04-30] 6,895 sequences; 36,104,098 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq1700 343 1e-89 seq1789 122 9e-23 seq5725 100 3e-16 seq1447 95.1 1e-14 >seq1700 Length=96718 Score = 343 bits (380), Expect = 1e-89 Identities = 594/850 (70%), Gaps = 25/850 (3%) Strand=Plus/Plus Query 132604 TTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGC 132663 ||||| || || || || ||||| || || || || || || | | ||| ||| | Sbjct 69178 TTTTGGTAATCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCTCCGAGGGAGATGTTC 69237 Query 132664 GTCATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTT---GGTGCCGATCAGGTCGACG 132720 ||| || || |||||||||| | |||||||||||| | |||||| | | | | Sbjct 69238 TCCATGAAGTCGAAGGGGTTGGTAGCGTTGTAGTGCTTCTGGTTGCCGA---GTGCCAGG 69294 Query 132721 AGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATG-GTTTCGCAATTAAGTCCCAG 132779 || || | |||||| ||||||||||||||||| ||||| | || || || | ||| || Sbjct 69295 AGGAGACGGTCGGCGACGAACTCGATGTATTGGCACATGAGCTTGGCG-TTCATTCCGAG 69353 Query 132780 CAGACGCACC-GGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGA 132838 || ||||| || || || || ||||| || ||||||||| |||| || ||||||| Sbjct 69354 GAG-CGCACATGGGAGGGCGTCTGTGAGGAACTCCTGCTCGATGACGACAGCCTCGGTGA 69412 Query 132839 CGATTTCCCTAACG-CGCGCCGCGCTCGGCCGTTGCACCAAATGCTTGAACATCAAGCAA 132897 ||| || |||| | | | | | |||| | || ||||| || ||| Sbjct 69413 TGATGTCTTCAACGACTTGGTTTGATGGCTTGTTGTTG-AGGTGAGAGAACAGCAGGCAG 69471 Query 132898 GCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCG 132957 ||||||||| |||| ||||||||| | ||| ||||| |||||| ||| || | |||| Sbjct 69472 GCAAAGTCGGTGTGCATGCCCTCGTCACGGGAGATGAGCTCGTTGGAGAAGGTGAGGCCG 69531 Query 132958 GGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACG 133017 |||||||| || || || || | ||| || || | |||||| || || ||||||| Sbjct 69532 GGCATGAGACCACGCTTCTTCAACCAGAAGATCGATGCGAAAGATCCGGAGAAGAAGATA 69591 Query 133018 CCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATC 133077 ||||| | ||| || || || | || || | | || |||| | ||| || |||| Sbjct 69592 CCCTCAATGGCGGCAAAGGCGATGAGACGGCAGGCAAAGGTGGAGTTCTTGTCGGAGATC 69651 Query 133078 CAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGATGGCGTTCAAC 133137 || ||||||||||| || ||||| | || ||| || || | ||||||||||| || Sbjct 69652 CACCGCAGCGCCCAGTCAGCCTTCTTACGGATGCATGGGATGTTGTCGATGGCGTTGAAG 69711 Query 133138 AA--ACG-GAGTTTCTCTTCCGAGGAACGC--ACGTAGGTGTCGATGAGGGTCGAATACA 133192 | ||| | ||| || || ||| | ||| |||||||||||| || || Sbjct 69712 AGGTACGTGCGTTGCTTG-----GGCTCGCTGATGTATGTGTCGATGAGGAGGGAGTATG 69766 Query 133193 TTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCA 133252 | || ||||| | ||||||||| ||| || |||||||| ||||| || |||||| | Sbjct 69767 TCTCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAGCGGGCCTCGGGGA 69826 Query 133253 CCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGG 133312 ||||||||| ||| ||||||| || || |||||||||||||| || || | Sbjct 69827 TTTGCACTTCTCCGCTGAAGCGCTCGATGAGGTTCTCGTTGACGATGCCATCCGAAGCAG 69886 Query 133313 CGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCGC---TCCC 133369 |||| |||||||| ||||| |||||| |||||||| |||||| | ||| | || Sbjct 69887 CGAAGAAGGCCAGGACGTGGGAGATGAAGAAGCGCTCGTCGTCGTTGAGACGCTTGTTCC 69946 Query 133370 AGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTT 133429 ||||| | |||||||| || || | ||||||| ||||||| || || |||||||| | Sbjct 69947 AGTCGTGAAGATCCTTGGAGAGATCGATCTCCTCGGCGGTCCAGAAGGAGGCCTCGGCCT 70006 Query 133430 TTTTGTACAT 133439 |||||||||| Sbjct 70007 TTTTGTACAT 70016 >seq1789 Length=118145 Score = 122 bits (134), Expect = 9e-23 Identities = 158/216 (73%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||| ||||| || |||||| | || || ||| | | Sbjct 19714 ATGCAGATCTTCGTCAAGACTCTCACTGGCAAGACGATCACCTTGGAGGTGGAGTCTTCG 19655 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | || || |||| ||||| ||||| |||||| | ||||| Sbjct 19654 GACACCATCGACAACG-TCAAGTCTAAGATCCAGGACAAGGAGGGCATTCCCCCAGACCA 19596 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 |||||| | || | ||| ||||| || || || |||| ||||| ||| |||||||| Sbjct 19595 ACAGCGATTGATCTTCGCCGGCAAGCAACTCGAGGACGGCCGCACGCTCTCGGACTACAA 19536 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 |||||| ||||| ||||||| ||| | || || || Sbjct 19535 CATCCAGAAGGAGTCGACGCTCCATCTCGTCCTCCG 19500 Score = 118 bits (130), Expect = 1e-21 Identities = 144/193 (75%), Gaps = 4/193 (2%) Strand=Plus/Minus Query 38268 ACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCA-AACGCTTAAAGA 38326 || || || ||||||||| | || || ||| || | || | | | | || | | |||| Sbjct 19918 ACTGGAAAGACCATCACCCTTGAGGTTGAGTCCTCGGATACCATCGACAATG--TGAAGA 19861 Query 38327 AAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCA 38385 || |||| ||||| ||||| ||||| | ||||| ||||| ||||| | |||||| | Sbjct 19860 GCAAGATCCAAGACAAGGAGGGCATTCCTCCAGACCAGCAGCGTCTCATCTTCGCGGGAA 19801 Query 38386 AACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGC 38445 | ||||| || || | ||||||||||| |||||||||||| || ||||| | || || | Sbjct 19800 AGCAGCTTGAGGATGGGCGCACCCTCAGCGACTACAACATTCAGAAGGAGTCCACTCTCC 19741 Query 38446 ATTTGGTGCTGCG 38458 | ||||||||||| Sbjct 19740 ACTTGGTGCTGCG 19728 >seq5725 Length=16029 Score = 100 bits (110), Expect = 3e-16 Identities = 96/123 (78%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 38337 GACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGAC 38396 ||||| || || ||||| | ||||||||||| || || | ||| ||||| ||||| || Sbjct 12332 GACAAGGAAGGCATTCCACCGGACCAACAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAG 12391 Query 38397 GACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTG 38456 |||| || |||||| ||||||||||||||| ||||| |||| || || ||||| || Sbjct 12392 GACGGCCGAACCCTCTCCGACTACAACATCCAGAAGGAGTCGACCCTCCACTTGGTTCTC 12451 Query 38457 CGT 38459 ||| Sbjct 12452 CGT 12454 >seq1447 Length=163572 Score = 95.1 bits (104), Expect = 1e-14 Identities = 133/183 (73%), Gaps = 4/183 (2%) Strand=Plus/Minus Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312 ||||| || || ||||||||||| || |||||| |||| || ||| | |||||| | | Sbjct 89221 TTCGTGAAGACCCTCACGGGCAAGACTATCACCCTCGAGGTGGAGTCGTCCGACACCATC 89162 Query 38313 CA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGC 38370 | |||| | |||| || |||| || || |||||||| || | ||||||||||| Sbjct 89161 GACAACG--TCAAGAGCAAGATCCAGGATAAGGAGGGAATCCCACCGGACCAACAGCGAT 89104 Query 38371 TCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAA 38430 | || | ||| || || || || || || | || || | | ||||||||||||||| | Sbjct 89103 TGATCTTCGCCGGAAAGCAACTCGAGGATGGCCGAACTTTGAGCGACTACAACATCCAGA 89044 Query 38431 AGG 38433 ||| Sbjct 89043 AGG 89041 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500129691356800