Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zymoseptoria_20brevis_20[genbank_20GCA_5F000983655.1_202015-04-30] 6,895 sequences; 36,104,098 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq1447 271 1e-67 seq2579 113 6e-20 seq1254 98.7 1e-15 seq4717 86.0 8e-12 >seq1447 Length=163572 Score = 271 bits (300), Expect = 1e-67 Identities = 516/757 (68%), Gaps = 12/757 (2%) Strand=Plus/Plus Query 7404 CTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAAT 7463 |||| |||| ||| ||||| ||||| | |||||| | ||| | ||||| | Sbjct 40995 CTTTTTTATTTTTGCGTTTGAACTCATTGACGAAGTGGTTGACGAGGCGGTTGTCGAAGT 41054 Query 7464 CTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAA 7523 | ||||||||||| || || || || || || | ||||| || ||||| || | |||| Sbjct 41055 CCTCACCACCCAAATGAGTGTCTCCGGCAGTGGACTTGACCTCGAAGATGCCCTCCTCAA 41114 Query 7524 TGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTAT 7583 || | | | || ||||| || || ||||| |||| ||| || ||||| ||||| | Sbjct 41115 TGGTAAGAAGAGAGACATCGAAGGTGCCACCGCCCAAGTCGAAGATGAGCACGTTGCGCT 41174 Query 7584 CGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAA 7643 || | || | ||||| ||||||||||| || || ||||| || || || ||||| || | Sbjct 41175 CGCCCTCAGTCTTCTTGTCGAGACCGTAGGCAATGGCCGCGGCGGTAGGCTCATTGATGA 41234 Query 7644 TACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAAT 7703 | || ||| ||||||||| || || | || || || || ||||| || || || | Sbjct 41235 TGCGCAGAACGTTCAGGCCGGCGATGAGACCAGCGTCCTTGGTTGCTTGGCGCTGAGAGT 41294 Query 7704 CGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATT 7763 |||| ||||| || ||||| || ||||| |||| ||||| | ||| || || | | Sbjct 41295 CGTTGAAGTATGCTGGGACAGTGACGACAGCGTTGTTGACTGTGCCACCAAGGTATGCCT 41354 Query 7764 CCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTT 7823 |||| | || ||| ||||| || ||||| ||||| ||||| || | | ||||| | Sbjct 41355 CCGCAGTCTCACGCATCTTGGTGAGGACCATTGATGAGATCTCCTCTGGTGTGAACTGCT 41414 Query 7824 TCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACC---GGGGATAA 7880 || || || || || || || | | | || || || |||| | ||| | Sbjct 41415 TCTCCTCGCCCTTGAACTCGACCTGCACGACCGGCTT----GC--CACCCTTGTTGATGA 41468 Query 7881 CCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGA 7940 |||| | | | | ||||| ||| | || |||| || ||||| | |||| Sbjct 41469 CCTTGAAGGGAAAGTGCTTCATGTCGGCCTGCACCTCAGCATCGTCGAACTTCCGGCCGA 41528 Query 7941 TAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCG 8000 | || ||||| || || || |||||||| |||||||||||| ||||||||| || | Sbjct 41529 TCAGGCGCTTGGCGTCGAAGACTGTGTTGACGGGGTTCATGGCGACTTGGTTCTTTGCGG 41588 Query 8001 CGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGAT 8060 || ||||| ||||| || | || || || |||||| |||| || || || || | Sbjct 41589 AATCACCGATGAGACGCTC---GGTGTCGGTGAAGGCGACGAACGAGGGTGTTGTGCGGT 41645 Query 8061 TCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAAT 8120 | || |||||||| || || || || | |||||| | | ||| ||| || || || | Sbjct 41646 TACCCTGGTCGTTGGCGATGATCTCAATGCGGTCATCTCTGTAGATGCCCACACATGAGT 41705 Query 8121 ACGTTGTTCCTAAATCAATACCGATTGCTTGAGTCAT 8157 | || || || ||||| |||||||||||| | | ||| Sbjct 41706 AGGTCGTACCCAAATCGATACCGATTGCTGGTGCCAT 41742 Score = 168 bits (186), Expect = 8e-37 Identities = 267/383 (70%), Gaps = 0/383 (0%) Strand=Plus/Plus Query 7010 TCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTA 7069 ||||| | | ||||||||| ||||| | || ||||| ||||| ||||| |||||||| Sbjct 40548 TCACCGGAGAGGATGGCGGCCTGGACGGCGGCACCGTAGGCGACGGCCTCGTCGGGGTTG 40607 Query 7070 ATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGG 7129 || | || | || || ||||| || | || || | ||| | || | || ||| Sbjct 40608 ATGGAGCGGTTGGGCTCCTTGCCGTTGAAGAAGTCGGAGACCATCTTCTGGACCTTGGGG 40667 Query 7130 ATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAG 7189 || || || |||||||||||||| ||||| || | || || || |||||||| | | Sbjct 40668 ATACGGGTGGATCCACCGACCAAGACGATCTCGTGGACGGAGGACTTGTCGATCTTGGCG 40727 Query 7190 TCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCC 7249 || || || || ||||| || ||||| ||||| | |||| |||| ||| Sbjct 40728 TCGCGGAGAGTGCGCTCGACGGGCTCCATGGTGGAGCGGAAGAGGTCCTGGCACAACTCC 40787 Query 7250 TCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATT 7309 || || || |||||||| ||||| || || || || || || ||||| | ||| || || Sbjct 40788 TCGAAGCGGGCACGGGTGATGGAGGTGTAAAAGTCGACACCCTCGTAGAGCGAGTCGATC 40847 Query 7310 TCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGT 7369 || |||| || ||||| | ||||| | || ||||| |||||||| || || || || Sbjct 40848 TCGATGGAGGTCTGTGCGGAGGAAGAGAGAGTGCGCTTCGCGCGCTCGCAAGCGGTGCGC 40907 Query 7370 AAACGACGAAGGGCACGCGGGTT 7392 | ||| || ||||| || | ||| Sbjct 40908 AGACGGCGGAGGGCGCGGGCGTT 40930 >seq2579 Length=129564 Score = 113 bits (124), Expect = 6e-20 Identities = 223/327 (68%), Gaps = 5/327 (2%) Strand=Plus/Plus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 |||||||| |||||||| | || || || || ||||| | | || || || | ||| Sbjct 66292 TCGAAATCCTCACCACCGAGATGGGTGTCACCGGCGGTAGACTGAACCTCGAACACACCC 66351 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGA-GTAC 7575 |||| | | || | || ||||| || ||||||||||| || || | | || | | Sbjct 66352 TGGTCAACGGTCAAGACGGAGACATCGAAAGTACCACCACCGAGATCGTAGACGATGATC 66411 Query 7576 GTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTC 7635 ||| || | ||| | |||| ||||| ||||| || | ||| || || || || || Sbjct 66412 TGGCGT-TCCTTGTC---GGTCTTGTCGAGGCCGTAGGCCAAAGCGGCGGCGGTGGGCTC 66467 Query 7636 ATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCG 7695 |||| | || ||| ||| || ||||| || | | ||||| || || || || Sbjct 66468 GTTAACCACGCGGAGAACGTTGAGACCAGCGATCGCGCCGGCATCCTTGGTGGCGGCACG 66527 Query 7696 TTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAG 7755 || | ||||| |||||||| ||||| || ||||| |||| ||||| |||| ||||| Sbjct 66528 CTGAGCGTCGTTGAAGTAGGCTGGGACAGTGACGACTGCGTTGGTGACCTTCTCTCCGAG 66587 Query 7756 ATACGATTCCGCGATATCTTTCATTTT 7782 || || || |||| || ||||| || Sbjct 66588 GTAGGACTCGGCGACCTCCTTCATCTT 66614 >seq1254 Length=140916 Score = 98.7 bits (108), Expect = 1e-15 Identities = 212/315 (67%), Gaps = 3/315 (1%) Strand=Plus/Plus Query 7468 ACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTT 7527 |||||||||||| || || || ||||| || ||||| |||| ||| || | |||| Sbjct 61807 ACCACCCAAGTGAGTGTCACCAGCGGTAGCCTTGACAGTGAAGACACCACCCTGGATGTG 61866 Query 7528 TAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTC 7587 | | ||| ||||| || || |||||||| || || | || || ||||| || | Sbjct 61867 GAGAAGCGAGACATCGAAAGTGCCACCACCAAGATCGTAGATCAGGACGTTGCGCTCCTT 61926 Query 7588 GTC--TTTGTTCTTAT-CGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAAT 7644 ||| | | | || | |||||||| || || || || || || || || || || || Sbjct 61927 GTCCGACTTTCCGGATCCAAGACCGTAGGCAATGGCGGCAGCGGTAGGCTCGTTGATGAT 61986 Query 7645 ACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATC 7704 ||| ||| ||| ||||||| || | | || || || || ||||| | || || Sbjct 61987 ACGGAGAACGTTGAGGCCAGAGATGGCACCGGCGTCCTTGGTAGCTTGCCTCTGGTTGTC 62046 Query 7705 GTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTC 7764 ||| ||||| || || || || | ||| || | | ||| ||||| ||||| | || Sbjct 62047 GTTGAAGTATGCGGGAACGGTGATGACGGCCTTGGAGACCTTCTTGCCGAGCTTGACCTC 62106 Query 7765 CGCGATATCTTTCAT 7779 ||||| || ||||| Sbjct 62107 AGCGATTTCCTTCAT 62121 >seq4717 Length=70946 Score = 86.0 bits (94), Expect = 8e-12 Identities = 119/162 (73%), Gaps = 6/162 (4%) Strand=Plus/Plus Query 7597 CTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAG-ACAGT 7655 ||| ||||||||||| |||| || || || || || || || || | ||| | |||| Sbjct 23921 CTTCTCGAGACCGTAGGCGAGGGCAGCAGCGGTAGGCTCGTTGATCACACGGTGAACAG- 23979 Query 7656 TCAGGCCAGCAATAGTTG--CCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTA 7713 |||| |||| ||| ||| | ||||| || || ||||||| ||| ||||||||||| Sbjct 23980 TCAGACCAGAAAT--TTGACCGGCATCCTTGGTTGCTTGTCTCTGCTGGTCGTTAAAGTA 24037 Query 7714 GGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAG 7755 ||| || || || || || |||| | ||| ||||| ||||| Sbjct 24038 GGCGGGAACAGTGACAACGGCGTTCTTGATGTTCTTTCCGAG 24079 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635078059491800