Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zymoseptoria_20brevis_20[genbank_20GCA_5F000983655.1_202015-04-30] 6,895 sequences; 36,104,098 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq3840 161 1e-34 seq1700 114 2e-20 seq85 91.5 2e-13 >seq3840 Length=90666 Score = 161 bits (178), Expect = 1e-34 Identities = 929/1460 (64%), Gaps = 53/1460 (4%) Strand=Plus/Minus Query 111933 CCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAACCAAGCTGGGCGTCG-CAA 111991 || ||||| || || |||||| ||| || ||||| || |||| ||||| | ||| Sbjct 35337 CCCATGCTGCGTGTGTTTAACAACACCGCTCGCTACGTCGACCA----GGGCGGCAACAA 35282 Query 111992 GGGATCTA------TCGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCT 112045 | || || | || | || | |||||||||||||| ||| || | ||| | Sbjct 35281 GCGACCTGGTGCTTTTGCCATGTACATCGAGCCATGGCACGCAGATGTCTTCTCCTTCTT 35222 Query 112046 TGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGTGC-CGCGATCTCTTCTCCGCTC 112104 || | || ||||| || | ||||||| || ||| |||||||| |||| || || Sbjct 35221 GGATCTCCGCAAGAACCACGGAAAGGAGGAGGTTCG-TGCTCGCGATCTGTTCTACGGTC 35163 Query 112105 TCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTT 112164 | ||| | |||||||||||||||||| | |||||| | | | || ||| || | | | Sbjct 35162 TGTGGGTCCCAGATCTCTTCATGAAGCGTGTTGAGCAAAATACCACCTGGACTTTGATGT 35103 Query 112165 GTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAAGCCCTCTACA 112224 | || || || |||||||| | |||| | || | ||||| || | || ||| Sbjct 35102 GCCCTCACGAGTGCCCCGGTCTGGCTGATGTCTACGGCGCTGAGTTCGAGGAGCTGTACG 35043 Query 112225 CAAAGTACGAGGAAGA----AAGTCGGGCGACTGCGACGGTGCCAGCTGCCGATG-TGTG 112279 |||||| || ||| || || || ||| || | ||| | || | | || Sbjct 35042 AGCGATACGAGCGTGAGGGCAAG--GGTCG--TGAGACCGTCCGCGCT-CAGAAGCTCTG 34988 Query 112280 GAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATATATGCTTTACAAAGACGC 112339 | | || || ||| || ||||||||||||| ||||| ||||| || || ||||| ||||| Sbjct 34987 GTATGCCATCCTCGAGGCTCAAACCGAGACCGGTACCCCATACATCCTCTACAAGGACGC 34928 Query 112340 CTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCTCTGTAC 112399 ||| ||||| || || ||||| ||||| ||| || ||||| ||||| || Sbjct 34927 TGCCAACAGCAAGAGCAACCAGAAGAACTTGGGAACCATCCGCAGCTCCAATCTCTGCAC 34868 Query 112400 AGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGC 112459 || || | || | || | || ||| || ||||| ||||| ||||| |||| Sbjct 34867 CGAGATTATCGAGTACACTGCTCCTGACGAGGTCGCCGTGTGCAACCTTGCATCTCTCGC 34808 Query 112460 TCTCCCCAAGTATGTGGATCCAGAGACAAAGA-CATTT-GATTATGAAAAACTCCACGAA 112517 || |||| || || || || || || || | ||| || | || || |||||| | Sbjct 34807 CCTGCCCACATACGTCGA--CATTGAGAACGAGCGTTTCGACTTCGAGAAGCTCCACCAG 34750 Query 112518 GTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGT- 112576 || || | || ||||| || ||| | |||| | || || || |||||||| Sbjct 34749 GTCACCCAGACCGTCACCAAGAACTTGAACAAGATCATCGAGGTCAACCACTACCCCGTG 34690 Query 112577 TGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTCCAAGGTCT 112636 ||| ||||| || || | | |||||||| || ||||| |||||| | ||||| Sbjct 34689 CCAGA-AGCTCGCAAGAGCAACTTCCGTCACCGTCCCATCGGTCTTGGTGTCAACGGTCT 34631 Query 112637 CGCGGATGTATTCAT-TCTTTGTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAATCA 112695 || |||| ||| | || || ||| | ||||| || || || | ||| Sbjct 34630 TGCTGATGCTTTCTTGGCTCTG-CGCATGCCTTTTGACTCTCCTGAGGCTCGCCAGCTCA 34572 Query 112696 ATGCGCGTATATTTGAGACAATGTATCACGCCGCTCT-------TGAGGCGAGTTCGGAG 112748 | | || || ||||| || || ||||| ||||| | | |||| || | Sbjct 34571 ACATCCAGATCTTCGAGACCATCTACCACGCTGCTCTCACCGCCTCATGCGATCTC---G 34515 Query 112749 TTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGG-GT 112807 || || || | ||| ||||| || || | ||||| || || | || |||||| | Sbjct 34514 CTGCCA-AGCT---TGGACCATACGAGACATACGAGGGGTCCCCCGTCTC-CAAGGGCGA 34460 Query 112808 GCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCT--TCACTACGACTGGGACGCTCTC 112865 ||| |||| || ||||||| |||| || | || || || ||||||| ||| ||| Sbjct 34459 GCTCCAATACGACATGTGGG-GTGTGACTCCTA-CTGATCTCTGGGACTGGGCCGCACTC 34402 Query 112866 AAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACA 112925 |||| ||| ||| | ||| | || ||| || | | || || |||||||| Sbjct 34401 AAGGCCAAGATCGCCGAGCATGGTGTCCGCAACTCGCTCCTCGTCGCTCCCATGCCAACT 34342 Query 112926 GCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGACGAACATC 112985 || |||||| | || ||| |||| || || || || || || ||||| | |||||| Sbjct 34341 GCGTCCACCTCGCAGATCATGGGCTTCAACGAGTGTTTCGAGCCATACACCAGCAACATC 34282 Query 112986 TATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAACAAGCATCTCGTGGATGAC 113045 || | | ||||| || ||||| | |||||||| | | || | ||| Sbjct 34281 TACTCCCGTCGTGTGCTCGCTGGTGAGTTCCAGGTTGTCAACCCGTGGTTGCTGAAGGAC 34222 Query 113046 CTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCATGGTGAAAGCGGGTGGT 113105 | ||| ||| |||||||| | | |||||| | | ||| | | |||||| Sbjct 34221 TTGGTCGAGCGTGGCCTCTGGTCAGACAACATGAAGAACCGCATCATCGCCGATGGTGGT 34162 Query 113106 TCCATTCAAAATATTGTGGATATTCCAGATGAAATTAAGAAGTTGTACCGCACAGTTTGG 113165 ||||| || ||| | || || ||||| | ||| ||||| || || ||| Sbjct 34161 TCCATCCAGCGCATTCCAAACATCCCCGATGACCTCAAGGCTCTGTACAAGACCGTCTGG 34102 Query 113166 GAAATCAAGATGAAGGATGTCATTGACATGGCCGCAGATCGTGGTCGCTTCATTGATCAA 113225 || |||| | | || || | ||| |||| || |||||| ||||| ||||| Sbjct 34101 GAGATCAGCCAGCGCCACATCGTTCAGATGTCCGCTGACCGTGGTGCTTTCATCGATCAG 34042 Query 113226 AGTCAAAGTATGAATCTATTCATGGAAAGTCCAACGATGTCCAAGCTCTCTTCTATGCAC 113285 ||| || |||| | |||| | || || ||| ||| || | |||||| Sbjct 34041 TCTCAGAGCCTGAACATCCACATGAAGGAGCCCACCATGGGCAAAATCACCAGCATGCAC 33982 Query 113286 ATGTACAGTTGGAAGAAGGGTCTCAAAACGGGGATGTATTACCTCCGATCTAAGGCAAAG 113345 | | | |||||| || || || || || ||||| ||||| || | | ||| | Sbjct 33981 TTCGCCGGCTGGAAGCTCGGCCTGAAGACTGGCATGTACTACCTTCGCACCATGGCGGCG 33922 Query 113346 GC-GCGCCCAATTCAGTTCA 113364 | |||||| |||||||||| Sbjct 33921 TCTGCGCCC-ATTCAGTTCA 33903 >seq1700 Length=96718 Score = 114 bits (126), Expect = 2e-20 Identities = 175/244 (72%), Gaps = 4/244 (2%) Strand=Plus/Minus Query 102090 CTCTTTGAAGCCATCCA-AACAGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAA 102148 ||||| | |||||| | |||| | ||||| || | ||||| || || ||||| || Sbjct 69713 CTCTTCAACGCCATCGACAACA-TCCCATGCATCCGTAAGAAGGCTGACTGGGCGCTGCG 69655 Query 102149 GTGGTT-TGATACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTG 102207 |||| | | |||| | | ||||||| || ||| |||| ||||| ||| Sbjct 69654 GTGGATCTCCGACAAGAACTCCA-CCTTTGCCTGCCGTCTCATCGCCTTTGCCGCCATTG 69596 Query 102208 AGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCA 102267 |||||||||||||||| || || ||| | || | ||| | |||||||| ||||||| Sbjct 69595 AGGGTATCTTCTTCTCCGGATCTTTCGCATCGATCTTCTGGTTGAAGAAGCGTGGTCTCA 69536 Query 102268 TGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGT 102327 |||| || ||| ||||||||||||||| ||||| ||||||||||| | ||| || | Sbjct 69535 TGCCCGGCCTCACCTTCTCCAACGAGCTCATCTCCCGTGACGAGGGCATGCACACCGACT 69476 Query 102328 TTGC 102331 |||| Sbjct 69475 TTGC 69472 >seq85 Length=589903 Score = 91.5 bits (100), Expect = 2e-13 Identities = 195/289 (67%), Gaps = 2/289 (1%) Strand=Plus/Plus Query 176732 AGACCCTTGATGTGGGAACCGTCGTTATCGGCATCCGTCATGATCATGAGACGACCATAC 176791 || || |||||||| || ||||| | ||| ||| ||||||||||| | | | ||||| Sbjct 246742 AGGCCTTTGATGTGAGAGCCGTCATGATCTTGATCGGTCATGATCATCAAATGGCCATAT 246801 Query 176792 CG-AAGCTCGGAAACATCTTGATAGTCCTTACCCTGTTGAAGACCCAAGATCTTCTTGAG 176850 || |||||| |||| || ||||| || || || ||||||| |||||||| Sbjct 246802 CGCAAGCTCTTTG-CATCGGTGTACTCCTTCTTGTGCTGGAGCCCCAAGAACTTCTTGAT 246860 Query 176851 ATCGTTGAACTCTTGGTTTGATGTGAGCTGTGTGACAGAGGCATCACGAACATTCTTACA 176910 | | || ||| ||| | | ||| ||||| ||||| ||||| ||| Sbjct 246861 GTTCTGGATCTCAGCGTTCTTCGAAATCTGATCAACAGATGCATCGCGAACGTTCAAGAT 246920 Query 176911 CTTCCCACGAAGAGGGAAGACACCGTAGTGATCGCGACCAACCACAGAGAGACCCGCAAC 176970 ||| || || | |||||||||||| |||| ||| || ||||||| | || || | Sbjct 246921 CTTTCCTCGCAACGGGAAGACACCGAAGTGGTCGGGATTGACCACAGCACGTCCAGCCAG 246980 Query 176971 CGCGAGCGTTTTCGCAGAATCACCCTCTGTCACGATGAGTGTACACTTG 177019 || ||| ||||||||||| || |||| ||| || |||||| || Sbjct 246981 GGCAAGCAGGGCAGCAGAATCACCTTCAGTCAAGATCAGAGTACACCTG 247029 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620688899764400