Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zymoseptoria_20brevis_20[genbank_20GCA_5F000983655.1_202015-04-30] 6,895 sequences; 36,104,098 total letters Query= NC_018874.1 Length=211518 Score E Sequences producing significant alignments: (Bits) Value seq4026 98.7 1e-15 >seq4026 Length=65649 Score = 98.7 bits (108), Expect = 1e-15 Identities = 117/159 (74%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 197418 CTTGTTGACCTGAGACACTCCGTTCATGTACAACACGTCAAAAGCAAAGACGCACACCTG 197477 |||||||||| ||| | ||||||| ||| | | |||||| |||||||||||||| | Sbjct 54347 CTTGTTGACCAGAGCCGACCCGTTCAGGTAGAGAATGTCAAAGGCAAAGACGCACACTTT 54406 Query 197478 GACGGTTATCTCTTCTTCCTTGACATCTTTACGTTTTCTGGTCGCCAGCTTTTGAAAGGG 197537 ||| | | ||||| | |||||||| || || | |||| || | ||||||||| Sbjct 54407 GACTTTGACGTCTTCCGCTTTGACATCCTTCTTCTTGCGGGTCATGAGTTGTTGAAAGGG 54466 Query 197538 AAGGATCTGCTTCTTCTCAACGTCCCAAGCAACTGCCTC 197576 |||| ||||||||||| || ||||| || || | ||| Sbjct 54467 GAGGACGTGCTTCTTCTCGACATCCCACGCCACAGTCTC 54505 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 676671274367600