Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zymoseptoria_20brevis_20[genbank_20GCA_5F000983655.1_202015-04-30]
6,895 sequences; 36,104,098 total letters
Query= NC_020104.1
Length=1021348
Score E
Sequences producing significant alignments: (Bits) Value
seq1789 93.3 3e-13
>seq1789
Length=118145
Score = 93.3 bits (102), Expect = 3e-13
Identities = 154/220 (70%), Gaps = 2/220 (1%)
Strand=Plus/Plus
Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610
||| |||||||| || | || || || || || || || || ||||||| || ||
Sbjct 19265 ACGCAGACGGAGCACCAAGTGCAGGGTGCTCTCCTTCTGAATGTTGTAATCAGAAAGTGT 19324
Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670
| | || ||||| ||||| || || || || || || |||||||| || || || ||
Sbjct 19325 CCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATGAGGCGCTGTTGATCCGGTGGGATACC 19384
Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAA 480729
||||||||||||||||| || || || || || || | || | | ||| |
Sbjct 19385 CTCCTTGTCTTGAATCTTCGACTTCACGTTGTCGATTGTGTCTGATGACTCCA-CTTCGA 19443
Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
| || ||||| || |||||||| ||||| ||||| |||||
Sbjct 19444 GTGTGATAGTCTTGCCGGTGAGTGTCTTGACGAAGATTTG 19483
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3267883439995460
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |