Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zymoseptoria_20brevis_20[genbank_20GCA_5F000983655.1_202015-04-30] 6,895 sequences; 36,104,098 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq1789 93.3 3e-13 >seq1789 Length=118145 Score = 93.3 bits (102), Expect = 3e-13 Identities = 154/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||| |||||||| || | || || || || || || || || ||||||| || || Sbjct 19265 ACGCAGACGGAGCACCAAGTGCAGGGTGCTCTCCTTCTGAATGTTGTAATCAGAAAGTGT 19324 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | | || ||||| ||||| || || || || || || |||||||| || || || || Sbjct 19325 CCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATGAGGCGCTGTTGATCCGGTGGGATACC 19384 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAA 480729 ||||||||||||||||| || || || || || || | || | | ||| | Sbjct 19385 CTCCTTGTCTTGAATCTTCGACTTCACGTTGTCGATTGTGTCTGATGACTCCA-CTTCGA 19443 Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | || ||||| || |||||||| ||||| ||||| ||||| Sbjct 19444 GTGTGATAGTCTTGCCGGTGAGTGTCTTGACGAAGATTTG 19483 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3267883439995460