Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zymoseptoria_20brevis_20[genbank_20GCA_5F000983655.1_202015-04-30] 6,895 sequences; 36,104,098 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq5360 105 2e-17 seq5130 96.9 1e-14 seq3840 96.9 1e-14 >seq5360 Length=131278 Score = 105 bits (116), Expect = 2e-17 Identities = 115/150 (77%), Gaps = 2/150 (1%) Strand=Plus/Plus Query 251839 TGGGCGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTCAGT 251898 |||||||| |||||||| |||||| || || || |||||||||||||||||| | || Sbjct 105373 TGGGCGATTGTCATACGGGAGGGAATGGCGTGAGGGTTGATGATGATGTCGGGTGTGAGA 105432 Query 251899 CCATCAGCAGTGAAGGGCATATCCTTTTCCTCAATA-ATGTTTCCAATAGTTCCCTTTTG 251957 ||||| || | ||| ||||| | ||| | | || || | || || || |||||||| Sbjct 105433 CCATCGGCGGAGAAAGGCATGT-CTTCTTGGCGGTAGGTGATGCCGATGGTACCCTTTTG 105491 Query 251958 TCCGTGACGAGAACTGAACTTATCACCAAT 251987 ||||||||||||| ||| || || ||||| Sbjct 105492 TCCGTGACGAGAAGCGAATTTGTCGCCAAT 105521 >seq5130 Length=76842 Score = 96.9 bits (106), Expect = 1e-14 Identities = 175/256 (68%), Gaps = 0/256 (0%) Strand=Plus/Minus Query 302563 ATCATAATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTT 302622 ||||| || ||||||| ||||| | ||||||||||||||| ||||| | || Sbjct 20616 ATCATGATCTCTTCCAGCGCCTTGACAAGACGACGCTGAATATATCCAGTCTCGGCAGTC 20557 Query 302623 TTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCC 302682 || ||||| |||||||| ||||| | ||||||||||| || || ||||| | ||| | Sbjct 20556 TTGACAGCGGTATCAATCAGACCTTCTCGACCACCCATGGCGTGAAAGAAGAACTCCTGG 20497 Query 302683 GGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCG 302742 || || || | || | | ||| |||| || || || || | | ||||| | ||| Sbjct 20496 GGAGTGAGACCACGAAGATAAGAGTTCTCGACAAATCCTCGTGATGCCGGCGAGTAATCG 20437 Query 302743 AACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCA 302802 ||||| || || ||||| | || || ||||| | || | ||||| || || Sbjct 20436 TCCTTGGGGAAATGGGGCAGCACACGGTACTTGAAGCCGAACGGCAATCGCTTGCCCTCG 20377 Query 302803 ACGTTCTGCTGTCCCA 302818 | ||||||||||| Sbjct 20376 AGAGACTGCTGTCCCA 20361 >seq3840 Length=90666 Score = 96.9 bits (106), Expect = 1e-14 Identities = 471/746 (63%), Gaps = 5/746 (1%) Strand=Plus/Plus Query 155629 TGTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGT 155688 |||| || | |||||| ||| || || || || |||||| || || |||||||||| Sbjct 34851 TGTACTCGATAATCTCGGTGCAGAGATTGGAGCTGCGGATGGTTCCCAAGTTCTTCTGGT 34910 Query 155689 TAGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTG 155748 | || ||||| ||| |||||||| || ||||||||||| || ||||| | || | Sbjct 34911 TGCTCTTGCTGTTGGCAGCGTCCTTGTAGAGGATGTATGGGGTACCGGTCTCGGTTTGAG 34970 Query 155749 CGTCCAGAATCTTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCG 155808 | || || || |||||| | | || | || |||| || Sbjct 34971 CCTCGAGGATGGCATACCAGAGCTTCTGAGCGCGGACGGTCTCACGACCCTTGCCCTCAC 35030 Query 155809 ACTCATATTTCATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGGC 155868 ||| ||| | |||||| | | || | ||||| |||| ||| || |||| Sbjct 35031 GCTCGTATCGCTCGTACAGCTCCTCGAACTCAGCGCCGTAGACATCAGCCAGACCGGGGC 35090 Query 155869 ACTTATCGGGGCAAAACAGCGACCAAATTTTATTACCGATTACACGCTCCATAAATACAT 155928 ||| | ||||| | || | ||| | |||| ||||||| ||| || | || Sbjct 35091 ACTCGTGAGGGCACATCAAAGTCCAGGTGGTATTTTGCTCAACACGCTTCATGAAGAGAT 35150 Query 155929 CACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGATTCT 155988 | |||| | | | ||||| || || | || |||||| | ||||| |||| Sbjct 35151 CTGGGACCCACAGACCGTAGAACAGATCGCGAGCACGAACCTCCTCCTTTCCGTGGTTCT 35210 Query 155989 TCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAAC 156048 | || || || ||||| | ||| | || |||||| | ||||| |||||| Sbjct 35211 TGCGGAGATCCAAGAAGGAGAAGACATCTGCGTGCCATGGCTCGATGTACATGGCAAAAG 35270 Query 156049 TACCATTCCTCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTA 156105 |||| | |||| || ||||| || || || ||||| || || || || |||| | Sbjct 35271 CACCAGGTCGCTTGTTGCCGCCCTGGTCGACGTAGCGAGCGGTGTTGTTAAACACACGCA 35330 Query 156106 GCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGC 156165 |||| || | | ||| ||||| || || ||||| |||| || | | || | || || Sbjct 35331 GCATGGGTACGAGACCGTTGGATGTTCCGTTGGTGCCGCTGATGTATGCTCCGGTTGCGC 35390 Query 156166 GAACATTATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCT 156225 ||| | || | | || ||||| || || | || || || ||||| || Sbjct 35391 GAATTCTGTGGACGTTGAGCCCAATGCCTCCGGCGTTCTTGGAGATCATGGCGCAGGTCT 35450 Query 156226 TTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAAC 156285 ||| || | | | || || ||||| ||||||| ||| | || |||| || Sbjct 35451 TTAATGTGTCGTAGATCCCATCAATGCTGTCATCTTTCATGTCGATGAGGAAGCAGGATG 35510 Query 156286 TTAATTGAG-GTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATAC 156344 | ||||| || | |||||||||||| |||| || ||||| | ||||| | || ||| Sbjct 35511 CCAGTTGAGCGTTG-GGTGTTCCAGCGCTGAACAGCGTAGGCGACGCATGTGTGAAGTAC 35569 Query 156345 TTATTAGACATATAATCGTATGTCTC 156370 || || ||||| || | ||| ||||| Sbjct 35570 TTGTTCGACATGTAGTTGTAGGTCTC 35595 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471687576413615