Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zymoseptoria_20brevis_20[genbank_20GCA_5F000983655.1_202015-04-30] 6,895 sequences; 36,104,098 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq1700 163 3e-34 seq3840 136 5e-26 seq2271 125 9e-23 seq4813 120 4e-21 >seq1700 Length=96718 Score = 163 bits (180), Expect = 3e-34 Identities = 226/314 (72%), Gaps = 2/314 (1%) Strand=Plus/Plus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 ||||| ||| || || || ||| |||||| |||||||||||||| |||| ||||| Sbjct 69175 GCCTTTTGGTAATCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCTCCGAGGGAGATG 69234 Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810 |||||| | ||| ||||||| | ||||||||||| | | ||||| | | | Sbjct 69235 TTCTCCATGAAGTCGAAGGGGTTGGTAGCGTTGTAGTGCTTCTGGTTGCCGAGTGCCAGG 69294 Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870 || || ||||||||||| ||||||||||| ||||||||||| ||||||||| |||| | Sbjct 69295 AGGAGACGGTCGGCGACGAACTCGATGTATTGGCACATGAGCTTGGCGTTCATTCCGAGG 69354 Query 868871 AGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATG 868930 ||||| || || | || | | ||||| | |||||| |||| |||||| |||| Sbjct 69355 AGCGCACATGGGAGGGCGTCTGTGAGGAACTCCTGCTCGATGACGACAGCCTCGGTGATG 69414 Query 868931 ATCTGCCTGGGC-ACGTCGGCCGAGGGCTTGTTGACGAGCATCGTGTAGAGCAGGCAGGC 868989 || | | | | || | | || ||||||||| ||| | | | ||||||||||| Sbjct 69415 ATGT-CTTCAACGACTTGGTTTGATGGCTTGTTGTTGAGGTGAGAGAACAGCAGGCAGGC 69473 Query 868990 AAAGTCGCAGTGCA 869003 ||||||| ||||| Sbjct 69474 AAAGTCGGTGTGCA 69487 Score = 129 bits (142), Expect = 7e-24 Identities = 204/288 (71%), Gaps = 11/288 (4%) Strand=Plus/Plus Query 869180 CCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTTC 869239 || ||||| || ||| | |||||| |||| ||||||||||||||| || |||||| Sbjct 69490 CCCTCGTCACGGGAGATGAGCTCGTTGGAGAAGGTGAGGCCGGGCATGAGACCACGCTTC 69549 Query 869240 TTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 869299 || | ||| ||||| | |||| || ||||| ||||| ||||| | |||||||||| Sbjct 69550 TTCAACCAGAAGATCGATGCGAAAGATCCGGAGAAGAAGATACCCTCAATGGCGGCAAAG 69609 Query 869300 CCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGT---TGATCCACTTCATCGCC 869356 ||||||| || |||||||||| ||| | ||||| ||||||| || |||| Sbjct 69610 GCGATGAGACGGCAGGCAAAGGTG--GAG----TTCTTGTCGGAGATCCACCGCAGCGCC 69663 Query 869357 CAGTCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCGCGAAAGAGGT-GGTCCTT 869415 ||||| ||||| || | | | || | ||||||||||| ||||||| || | | Sbjct 69664 CAGTCAGCCTTCTTACGGATGCATGGGATGTTGTCGATGGCGTTGAAGAGGTACGTGCGT 69723 Query 869416 TTCGGCCGGGTCCTTGACATAGGTGTCGATCAGGAGCGAATAGGTCTC 869463 | | || || ||| || |||||||| ||||| || || ||||| Sbjct 69724 TGC-TTGGGCTCGCTGATGTATGTGTCGATGAGGAGGGAGTATGTCTC 69770 Score = 125 bits (138), Expect = 9e-23 Identities = 180/253 (71%), Gaps = 7/253 (3%) Strand=Plus/Plus Query 869633 GAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGG 869692 |||||||||||||| || ||||||||||||||| ||| | |||| | | ||| Sbjct 69772 GAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAGCGGGCCTCGGGGATTTGC 69831 Query 869693 ACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAA 869752 || || |||| || || ||||||||| |||||||| || || ||||| Sbjct 69832 ACTTCTCCGCTGAAGCGCTCGATGAGGTTCTCGTTGACGATGCCATCCGAAGCAGCGAAG 69891 Query 869753 AAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGAGCGACAC-----CCAGT 869807 || ||||||||||| ||| ||| ||||||||||||| ||| ||| | ||||| Sbjct 69892 AAGGCCAGGACGTGGGAGATGAAGAAGCGCTCGTCGTCGTTGA--GACGCTTGTTCCAGT 69949 Query 869808 GGACGGTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTT 869867 | || | ||| || | ||||||||||||||||| |||||||||||||||| Sbjct 69950 CGTGAAGATCCTTGGAGAGATCGATCTCCTCGGCGGTCCAGAAGGAGGCCTCGGCCTTTT 70009 Query 869868 TGTACATCTCCCA 869880 ||||||| | ||| Sbjct 70010 TGTACATTTGCCA 70022 >seq3840 Length=90666 Score = 136 bits (150), Expect = 5e-26 Identities = 212/303 (70%), Gaps = 0/303 (0%) Strand=Plus/Plus Query 1630062 GCACTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTT 1630121 || ||||||||||||||| || |||| |||||| || || |||||||| ||||| ||||| Sbjct 35290 GCCCTGGTCGACGTAGCGAGCGGTGTTGTTAAACACACGCAGCATGGGTACGAGACCGTT 35349 Query 1630122 GGACTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAA 1630181 ||| ||||||||||| | ||| || |||| ||||| | |||| || | Sbjct 35350 GGATGTTCCGTTGGTGCCGCTGATGTATGCTCCGGTTGCGCGAATTCTGTGGACGTTGAG 35409 Query 1630182 GCCGATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCC 1630241 || ||||| ||||| ||||||||| | ||||| || | ||||||||||| || Sbjct 35410 CCCAATGCCTCCGGCGTTCTTGGAGATCATGGCGCAGGTCTTTAATGTGTCGTAGATCCC 35469 Query 1630242 CTCGATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGT 1630301 || || ||| | |||||||| | ||| ||||| || | ||| | || | || Sbjct 35470 ATCAATGCTGTCATCTTTCATGTCGATGAGGAAGCAGGATGCCAGTTGAGCGTTGGGTGT 35529 Query 1630302 GCCGGCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACATGGCGTCGTA 1630361 || ||| |||| ||||| |||| ||| ||||| ||| ||||||| || ||| Sbjct 35530 TCCAGCGCTGAACAGCGTAGGCGACGCATGTGTGAAGTACTTGTTCGACATGTAGTTGTA 35589 Query 1630362 GGT 1630364 ||| Sbjct 35590 GGT 35592 Score = 96.9 bits (106), Expect = 4e-14 Identities = 135/184 (73%), Gaps = 4/184 (2%) Strand=Plus/Plus Query 1627334 GGTTGACCACGGTAAAGTCGCCCGAGAGCACGCGGCGCGTGTAGATGTTGTTGGTG-ATG 1627392 ||||||| || || || || | |||||| || || | |||||||||| ||||| ||| Sbjct 34239 GGTTGACAACCTGGAACTCACCAGCGAGCACACGACGGGAGTAGATGTTGCTGGTGTATG 34298 Query 1627393 ACCTCGCACGCCTCGGTGTTGCCCAGGATCTGCGACGTCGTGGCCGTGGGCATGAGCGCC 1627452 | ||| | |||| || ||||| ||||||||| || | || || |||||| | || Sbjct 34299 GC-TCGAAACACTCGTTGAAGCCCATGATCTGCGAGGTGGACGCAGTTGGCATGGGAGCG 34357 Query 1627453 ACGAGGAGCGAGTTGCGCAGGCCGTGCT-GTCGAACTAGCGCGCGCAGCGCGTCCCAGTC 1627511 ||||||||||||||||| | || |||| | ||| || | || || ||| ||||||| Sbjct 34358 ACGAGGAGCGAGTTGCGGACACCATGCTCGGCGATCTTG-GCCTTGAGTGCGGCCCAGTC 34416 Query 1627512 CCAG 1627515 |||| Sbjct 34417 CCAG 34420 Score = 95.1 bits (104), Expect = 1e-13 Identities = 150/214 (70%), Gaps = 1/214 (0%) Strand=Plus/Plus Query 18088 GTCACCACCTTTGGCGAGTCGCACGGGGCGGGCGTCGGCTGCATCATCGACGGCGTGCCG 18147 |||||||||| |||||| |||||||| ||||||| |||||| ||||||| ||||| Sbjct 23442 GTCACCACCTATGGCGAATCGCACGGCAAAAGCGTCGGATGCATCGTCGACGGTGTGCCT 23501 Query 18148 CCGTGCATGCCACTGGCCGAGGCCGACATCCAGCCTCAGTTGGATCGGCGCCGACCGGGC 18207 ||| || | || | || || || ||||| || || || ||||| || || Sbjct 23502 CCGGGCCTCGAGCTCACGGAAGCTGATATCCAACCCTCCATGACCCGCCGCCGCCCTGGA 23561 Query 18208 CAGGGCGCACTTTCCACGCCGCGCAACGAGCCCGATCGCGTCATCATCCAGTCGGGCACG 18267 ||| ||||||| | || || ||| ||||| ||| || |||||||||||||| Sbjct 23562 CAGAGCGCACTCACGACACCTCGCGACGAGAAAGATATGGTGGAAATCCAGTCGGGCACA 23621 Query 18268 GAGAACGGCCTCACGCTCGGCTCGCCCGTCGGCC 18301 ||| | ||| | || | || || ||||| |||| Sbjct 23622 GAGCATGGCATTACATTGGGGTCACCCGT-GGCC 23654 Score = 93.3 bits (102), Expect = 5e-13 Identities = 108/146 (74%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 19047 GACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAG 19106 ||||| ||||||||||| || || || || ||| ||| || | |||||||| ||| Sbjct 24078 GACAGTATCGGCGGCACCGTTACCTGTGTCATTCGTAACTGTCCCTCCGGCCTCGGGGAG 24137 Query 19107 CCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACC 19166 || || || ||||| |||| ||| | ||||| ||||||||||| ||||| || ||| Sbjct 24138 CCTTGTTTCGACAAACTCGAAGCCACCCTCGCGCACGCCATGCTCAGCATCCCTGCGACC 24197 Query 19167 AAGGGATTCGAGATTGGCAGCGGGTT 19192 || || ||||| || ||| ||| || Sbjct 24198 AAAGGCTTCGAAATCGGCTCCGGATT 24223 >seq2271 Length=357209 Score = 125 bits (138), Expect = 9e-23 Identities = 127/163 (78%), Gaps = 2/163 (1%) Strand=Plus/Minus Query 1592132 TGGGACAAGGAGTTT-TGCGACGTCGAGCAGCCCACCCTCTTTGAGTTGATCCTCGCCGC 1592190 |||||| || |||| ||| | || || ||| | || || ||| | || ||||| || Sbjct 145256 TGGGACCAGAAGTTCATGC-AGGTGGACCAGGAGATGCTGTTCGAGATCATTCTCGCAGC 145198 Query 1592191 CAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAACATGAT 1592250 ||||||| | || |||||| | || |||||| | || |||||| | || || |||||||| Sbjct 145197 CAACTACATGGATATCAAGGCGCTTCTCGATGTGGGCTGCAAGACCGTCGCAAACATGAT 145138 Query 1592251 CAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATC 1592293 |||||||||||| ||||||||||||||||| || || |||||| Sbjct 145137 CAAGGGCAAGTCTCCCGAGGAGATCCGCAAAACTTTCAACATC 145095 >seq4813 Length=139967 Score = 120 bits (132), Expect = 4e-21 Identities = 154/209 (74%), Gaps = 4/209 (2%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| | | ||| || || |||| ||||||||| ||||||| | || Sbjct 22224 GCTTGGCCAGCTCACCGGGGAGGATGAGTCGGACGGAGGTCTGGATTTCGCGCGAGGAGA 22283 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCG-CCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATC 1254461 ||||| |||||| | |||| |||| | |||||||| ||| ||| |||| Sbjct 22284 TCGTGGACTTCTTGTTGTA-TGCGGCCAGCTTGGATGCCTCGGTTGCGACGCGCTCGAAG 22342 Query 1254462 ATGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGG 1254521 ||||||||||| || ||||||| || ||||| | ||||||||| || ||| ||| Sbjct 22343 ATGTCGTTGACGAAAGAGTTCAGGATGGACATGGCACGGTTGGAGATACCGGTGTCAGGG 22402 Query 1254522 TGCACCTGCTTGAGCACCTTGTAGATGAA 1254550 || ||||||||||| || || ||||||| Sbjct 22403 TGGACCTGCTTGAGGAC--TGGAGATGAA 22429 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6106573364010715