Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zymoseptoria_20brevis_20[genbank_20GCA_5F000983655.1_202015-04-30] 6,895 sequences; 36,104,098 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq3059 161 8e-35 seq1789 82.4 6e-11 >seq3059 Length=93957 Score = 161 bits (178), Expect = 8e-35 Identities = 224/314 (71%), Gaps = 0/314 (0%) Strand=Plus/Minus Query 34309 ACGATGAGCTCAGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAA 34368 ||| ||| | | ||||| ||||| | || || || | |||||||||| |||||| Sbjct 69832 ACGCTGACCACGGTCTCAGGGTTCTTGCACTCTTTGCAGAGCACAAACTTGTTGATGAAG 69773 Query 34369 CCATCAAGCAGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCG 34428 ||||| || |||||| | ||| | ||||| | |||||||| ||| | || || Sbjct 69772 CCATCGAGGTAGTCCTGAAGCTTGCTTGCTTCGTGAGCGCCGTTGATGATCCAGCGGTCA 69713 Query 34429 TTTTTGTAATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAA 34488 | ||| ||||| | || || || ||||||||| | || |||||||| || ||| Sbjct 69712 TCCTTGGGATCGATGTTTGTCTGAGCACCCAGCTCGAAGCCAAAGTACTTGATCACGTAG 69653 Query 34489 ATGGCCGGACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATG 34548 | | || || | ||| || |||| | | || |||||||||||| ||||||||| Sbjct 69652 TTTGGTGGGCGGGCGAGCTGCTGAGCGACGTTGCTCAGGTTGACGATGACGGTCTTGATG 69593 Query 34549 CCGTTGCCCTTTCCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCG 34608 ||||| ||||||||||||||||||| ||||||| ||| |||||||||||||| | | Sbjct 69592 CCGTTACCCTTTCCTTCGACCTTGGACTGGATGCGCTCCATCTTGTAGCGGTAGAAAGGG 69533 Query 34609 TCCGCCACATTGCG 34622 ||| |||| ||| Sbjct 69532 TCCTGGACATCGCG 69519 >seq1789 Length=118145 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 |||||||| || ||||| || | |||||||| || || || ||||| |||| | Sbjct 19486 ATGCAAATCTTCGTCAAGACACTCACCGGCAAGACTATCACACTCGAAGTGGAGTCATCA 19427 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 || || ||| | | || || ||||||| ||||| || || | || ||||||| Sbjct 19426 GACACAATCGACAACGTGAAGTCGAAGATTCAAGACAAGGAGGGTATCCCACCGGATCAA 19367 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 || | || || | || || || ||||| ||||| | | | ||| | | ||||||||| Sbjct 19366 CAGCGCCTCATCTTCGCCGGCAAGCAGCTTGAGGACGGCCGGACACTTTCTGATTACAAC 19307 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGGA 110500 ||||| || || || ||||| ||||| | | ||||| || ||| Sbjct 19306 ATTCAGAAGGAGAGCACCCTGCACTTGGTGCTCCGTCTGCGTGGAGGA 19259 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412806907759235