Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zymoseptoria_20brevis_20[genbank_20GCA_5F000983655.1_202015-04-30] 6,895 sequences; 36,104,098 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq1700 87.8 2e-12 >seq1700 Length=96718 Score = 87.8 bits (96), Expect = 2e-12 Identities = 129/182 (71%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 110712 GCTCGATGATATTATTGTTCACGATGACGTCGGCGGCAGCGAAAAAGGCGAGAACGTGTT 110771 ||||||||| || | ||| |||||| | || | |||||||| ||||| || ||||| Sbjct 69848 GCTCGATGAGGTTCTCGTTGACGATGCCATCCGAAGCAGCGAAGAAGGCCAGGACGTGGG 69907 Query 110772 TAAGAAAGAATCGTTCCTTGTCGTTCAGTTTATTGTTCCAGTCTTCAAAGTCCTTGGACA 110831 | ||||| || || | |||||| || ||||||||||| | || |||||||| | Sbjct 69908 AGATGAAGAAGCGCTCGTCGTCGTTGAGACGCTTGTTCCAGTCGTGAAGATCCTTGGAGA 69967 Query 110832 TGTCGATCTCTTCGACCTTCCAGTGACAATCGACCGCCTTCTTGTACGATTGCCAAAGAT 110891 |||||||| ||| | ||||| | | | ||||| |||||| ||||| |||| Sbjct 69968 GATCGATCTCCTCGGCGGTCCAGAAGGAGGCCTCGGCCTTTTTGTACATTTGCC--AGAT 70025 Query 110892 CT 110893 || Sbjct 70026 CT 70027 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445056038426400