Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zymoseptoria_20brevis_20[genbank_20GCA_5F000983655.1_202015-04-30] 6,895 sequences; 36,104,098 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq3840 131 2e-25 seq1789 105 7e-18 seq1447 84.2 2e-11 >seq3840 Length=90666 Score = 131 bits (144), Expect = 2e-25 Identities = 571/892 (64%), Gaps = 25/892 (3%) Strand=Plus/Minus Query 7525 TACTTGTTGAAAATCAACGGCGAATGCGCGGAACGAATTCAACACATGCTGTTGCGCGTG 7584 ||| | |||| ||||||||| | || || || ||||| ||| | |||| ||| Sbjct 35694 TACCTTTTGAGGATCAACGGCAAGGTTGCCGAGAGACCACAACAGATGATCATGCGTGTG 35635 Query 7585 GCGGTGGGCATTCACGGCGAAGACATTGACGCCGCCTTGGAAACGTACCAAATGATGTCT 7644 || || ||||| |||||||| ||||| || ||||| | || || ||| | ||||| Sbjct 35634 GCCGTCGGCATCCACGGCGAGGACATCGAGTCCGCCATTGAGACCTACAACTACATGTCG 35575 Query 7645 TTGAAACAGTTTACGCACGCTTCGCCCACCATGTTTGCCGCGGGCACA---AACGCGCCT 7701 || | || || || || ||||| || |||| ||| || ||| ||||| | Sbjct 35574 AACAAGTACTTCACACATGCGTCGCCTACGCTGTTCAGCGCTGGAACACCCAACGC---T 35518 Query 7702 CAATTGTCCTCGTGTTTTTTGCTAACCATGCGCGAAGACAGCATCGACGGCATTTACAAC 7761 ||| || | || || || | | |||| || |||||||| || || || ||| || Sbjct 35517 CAACTGGCATCCTGCTTCCTCATCGACATGAAAGATGACAGCATTGATGGGATCTACGAC 35458 Query 7762 ACGCTGCGCGATTGCGCCAATATTTCCAAATACGGCGGCGGAATAGGTCTGAACGTAAAC 7821 || | ||||||| || ||||| ||| ||| || || || || ||||| || Sbjct 35457 ACATTAAAGACCTGCGCCATGATCTCCAAGAACGCCGGAGGCATTGGGCTCAACGTCCAC 35398 Query 7822 GACGTGCGCGCCAACGGTAGCCG-CATCGTGTCCACCAACGGAAAAGCCAGCGGTTTAGA 7880 | ||||| | ||| ||| |||| ||||||||||| | ||| |||| | | Sbjct 35397 AGAATTCGCGCAACCGG-AGCATACATCAGCGGCACCAACGGAACATCCAACGGTCTCGT 35339 Query 7881 GCCCATGTTGCGCGTGTTCAATAACGCGGTGCGACATGTAGACCAGGGGGG---AAAGCG 7937 |||||| |||| ||||| || ||| | | || | || |||||||| || ||||| Sbjct 35338 ACCCATGCTGCGTGTGTTTAACAACACCGCTCGCTACGTCGACCAGGGCGGCAACAAGCG 35279 Query 7938 CAAAGGCGCCGCTGCCATCTATTTGGAGCCGTGGCACGCGGACATTTACGCAGTGCTAAA 7997 || || |||||| || | ||||| |||||||| || | | | | | | | Sbjct 35278 ACCTGGTGCTTTTGCCATGTACATCGAGCCATGGCACGCAGATGTCTTCTCCTTCTTGGA 35219 Query 7998 TCTGCGTCGCAACATGGGTTGCGAAGACAGCAAAGCGCGCGATCTATTCTTCGGATTGTG 8057 ||| || ||| || || || || |||||||| |||| ||| |||| Sbjct 35218 TCTCCGCAAGAACCACGGAAAGGAGGAGGTTCGTGCTCGCGATCTGTTCTACGGTCTGTG 35159 Query 8058 GGTGCCCGATCTGTTTATGAGGCGCGTTCATTTCGACGCACAA--TGGTCGCTCATGTGC 8115 ||| || ||||| || |||| ||| ||| | | | || | ||| | | |||||| Sbjct 35158 GGTCCCAGATCTCTTCATGAAGCGTGTTGA--GCAAAATACCACCTGGACTTTGATGTGC 35101 Query 8116 CCCGATCGTTGCCCTTTATTAAAAAACGTTTACGGTTCAAAATTTGAACAATTGTACAAA 8175 || | ||||| | | || ||||| | | || || | ||||| | Sbjct 35100 CCTCACGAGTGCCCCGGTCTGGCTGATGTCTACGGCGCTGAGTTCGAGGAGCTGTACGAG 35041 Query 8176 CAATACGAACACGACGGC--GCGTACGTGCGGCAAGTGAAAGCGCGCGACCTGCACCG-- 8231 | |||||| | || ||| | || |||| | | | |||| | | || | | Sbjct 35040 CGATACGAGCGTGAGGGCAAGGGT-CGTGAG---ACCGTCCGCGCTC-AGAAGCTCTGGT 34986 Query 8232 -CGCCATTATCGAATGTCAAAACGAAACCGGTATGCCGTACATGCTGTACAAAGACGCTT 8290 ||||| |||| ||||| ||| ||||||| || ||||| || ||||| |||||| Sbjct 34985 ATGCCATCCTCGAGGCTCAAACCGAGACCGGTACCCCATACATCCTCTACAAGGACGCTG 34926 Query 8291 GCAACGCCAAAAGCAATCAAAGCAACGTGGGCACCATTTGTTGCAGCAATCTGTGCGCTG 8350 |||| ||| ||||| || | ||| |||| ||||| | || |||||| ||| | | Sbjct 34925 CCAACAGCAAGAGCAACCAGAAGAACTTGGGAACCATCCGCAGCTCCAATCTCTGCACCG 34866 Query 8351 AAATTGTACAGTACAGCGCGCCCGACGAAGTGGCCGTTTGCAATCTAGCGTC 8402 | ||| | |||||| || || ||||| || ||||| ||||| || || || Sbjct 34865 AGATTATCGAGTACACTGCTCCTGACGAGGTCGCCGTGTGCAACCTTGCATC 34814 >seq1789 Length=118145 Score = 105 bits (116), Expect = 7e-18 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 134483 CTTTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC 134542 || |||||| | || || | ||| | ||| || ||| ||||| ||||||||||| || Sbjct 19256 CTGTCCTCCACGCAGACGGAGCACCAAGTGCAGGGTGCTCTCCTTCTGAATGTTGTAATC 19315 Query 134543 GCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGG 134602 || || | ||| || ||||| ||||| || || || | ||||| ||||| || Sbjct 19316 AGAAAGTGTCCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATGAGGCGCTGTTGATCCGG 19375 Query 134603 CGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTC 134662 || || || || || |||||||| || || || ||| | |||||| || || || Sbjct 19376 TGGGATACCCTCCTTGTCTTGAATCTTCGACTTCACGTTGTCGATTGTGTCTGATGACTC 19435 Query 134663 CACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||| ||||| || || || || ||||| | || || ||||| |||||||| Sbjct 19436 CACTTCGAGTGTGATAGTCTTGCCGGTGAGTGTCTTGACGAAGATTTGCAT 19486 Score = 98.7 bits (108), Expect = 1e-15 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 ||||| || ||||| || ||||| || ||||||||||| | ||| | ||| ||| Sbjct 19506 ACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGGCCGTCCTCG 19565 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 || || ||||| || || ||||| ||||| || || || || ||||| || || || || Sbjct 19566 AGTTGCTTGCCGGCGAAGATCAATCGCTGTTGGTCTGGGGGAATGCCCTCCTTGTCCTGG 19625 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || || ||||| ||| | ||||| || || ||||| || | || || || || Sbjct 19626 ATCTTAGACTTGACGTTGTCGATGGTGTCCGAAGACTCCACCTCCAAGGTGATCGTCTTG 19685 Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || | ||| || ||||| || ||||| Sbjct 19686 CCAGTGAGAGTCTTGACGAAGATCTGCAT 19714 Score = 96.9 bits (106), Expect = 4e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| |||| ||| | ||| || ||||| ||||| |||||||||||||||| Sbjct 19716 CCACCACGGAGGCGCAGCACCAAGTGGAGAGTGGACTCCTTCTGAATGTTGTAGTCGCTG 19775 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| | || || ||||| || || || || || | ||||||||| || || || Sbjct 19776 AGGGTGCGCCCATCCTCAAGCTGCTTTCCCGCGAAGATGAGACGCTGCTGGTCTGGAGGA 19835 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||| || || ||||| || || || || ||| | || || || || || || Sbjct 19836 ATGCCCTCCTTGTCTTGGATCTTGCTCTTCACATTGTCGATGGTATCCGAGGACTCAACC 19895 Query 134667 TCGAGAGTAATGGTTTTACCGGT 134689 || || || ||||| || || || Sbjct 19896 TCAAGGGTGATGGTCTTTCCAGT 19918 >seq1447 Length=163572 Score = 84.2 bits (92), Expect = 2e-11 Identities = 130/183 (71%), Gaps = 2/183 (1%) Strand=Plus/Plus Query 134524 CCTTTTGAATGTTGTAGTCGC-CAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAA 134582 |||| || ||||||||||||| ||| | | | | || ||||| || || || || || Sbjct 89041 CCTTCTGGATGTTGTAGTCGCTCAAAGTTCGGCCA-TCCTCGAGTTGCTTTCCGGCGAAG 89099 Query 134583 ATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCG 134642 ||||| ||||| || || || || || || || || || || || || ||||| | Sbjct 89100 ATCAATCGCTGTTGGTCCGGTGGGATTCCCTCCTTATCCTGGATCTTGCTCTTGACGTTG 89159 Query 134643 TCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACG 134702 || | ||||||||||| ||||| ||||| || || || || || || | || || ||| Sbjct 89160 TCGATGGTGTCGGACGACTCCACCTCGAGGGTGATAGTCTTGCCCGTGAGGGTCTTCACG 89219 Query 134703 AAA 134705 ||| Sbjct 89220 AAA 89222 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505354840975400