Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zymoseptoria_20brevis_20[genbank_20GCA_5F000983655.1_202015-04-30] 6,895 sequences; 36,104,098 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq3840 194 2e-44 seq1700 170 2e-37 >seq3840 Length=90666 Score = 194 bits (214), Expect = 2e-44 Identities = 1161/1840 (63%), Gaps = 39/1840 (2%) Strand=Plus/Plus Query 117805 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 117864 ||||||||||||| | | ||| | | || ||||||||||| || ||||| || | Sbjct 33903 TGAACTGAATGGGCGCAGACGCCGCCATGGTGCGAAGGTAGTACATGCCAGTCTTCAGGC 33962 Query 117865 CCTGCTTCCAGGCATACATATGCATTGAGGACAACTTGGAGAGGGTTGGACTTTCCATGA 117924 | |||||||| | | ||||| || | ||| | ||| || | |||| Sbjct 33963 CGAGCTTCCAGCCGGCGAAGTGCATGCTGGTGATTTTGCCCATGGTGGGCTCCTTCATGT 34022 Query 117925 AGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCATATCAATCA 117984 || ||||| || || || ||||||||||| || || || || | ||| | || | Sbjct 34023 GGATGTTCAGGCTCTGAGACTGATCGATGAAAGCACCACGGTCAGCGGACATCTGAACGA 34082 Query 117985 CATCCTTCATCTTGATTTCCCACACAGTCCTGTAGAGGTTCTTAATATCATCTGGGATAT 118044 | | |||| ||||| || ||| |||| || ||| | ||||| ||||| | Sbjct 34083 TGTGGCGCTGGCTGATCTCCCAGACGGTCTTGTACAGAGCCTTGAGGTCATCGGGGATGT 34142 Query 118045 CCACGATATTTTGGATGGATCCACCCGCCTTGACCATGAGATCCTTCATATCCTTTGACC 118104 || |||||||| ||||| | || ||| | | |||||| | | ||||| Sbjct 34143 TTGGAATGCGCTGGATGGAACCACCATCGGCGATGATGCGGTTCTTCATGTTGTCTGACC 34202 Query 118105 AGAGACCAATCTTTTTGAGATCCTCCACGAGATGCTTATTGACAACAACAAACTCACCCG 118164 |||| ||| || | |||| || | | |||||||| |||||||| | Sbjct 34203 AGAGGCCACGCTCGACCAAGTCCTTCAGCAACCACGGGTTGACAACCTGGAACTCACCAG 34262 Query 118165 CGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCA 118224 |||| || | ||||| ||| | ||||||||||| || ||||| ||| |||| Sbjct 34263 CGAGCACACGACGGGAGTAGATGTTGCTGGTGTATGGCTCGAAACACTCGTTGAAGCCCA 34322 Query 118225 AGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCT 118284 ||| || | ||||| || || |||||||| || | ||| || ||| |||| ||| | Sbjct 34323 TGATCTGCGAGGTGGACGCAGTTGGCATGGGAGCGACGAGGAGCGAGTTGCGGACACCAT 34382 Query 118285 TTTCCCTAATGCGTTCCTTGAGAGCGTCCCAGTCGTAGTTGAGCTTT----GTCTCCCCC 118340 || || ||||||| ||| ||||||| || || | | ||| | ||| Sbjct 34383 GCTCGGCGATCTTGGCCTTGAGTGCGGCCCAGTCCCAGA-GATCAGTAGGAGTCACACCC 34441 Query 118341 TGCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATAT 118400 ||||| || | ||||| || | ||| | || || ||||| ||||||| ||| Sbjct 34442 ---CACATGTCGTATTGGAGCTCGCCCTTGGAGACGGGGGACCCCTCGTATGTCTCGTAT 34498 Query 118401 GGGCCCTCAACCT---CCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTT 118457 || || || || | || | ||| | || ||| || ||||| || || || Sbjct 34499 GGTCC---AAGCTTGGCAGCGAGATCGCATGAGGCGGTGAGAGCAGCGTGGTAGATGGTC 34555 Query 118458 TCAAAAATGCGAGCATTCAT-TGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAA 118516 || || || | || | || | | |||| || ||||| | | || || | Sbjct 34556 TCGAAGATCTGGATGTTGAGCTGGCGAG-CCTCAGGAGAGTCAAAAGGCATGCG-CAGAG 34613 Query 118517 --AATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTA 118574 || ||| |||| || ||||| | |||||| || || || || || || | | || Sbjct 34614 CCAAGAAAG-CATCAGCAAGACCGTTGACACCAAGACCGATGGGACGGTGACGGAAGTTG 34672 Query 118575 GACTTCCGAGCGGTCTC-CACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTT 118633 ||| ||||| ||| |||||| || || ||||| | | | || | || || Sbjct 34673 CTCTTGCGAGCT-TCTGGCACGGGGTAGTGGTTGACCTCGATGATCTTGTTCAAGTTCTT 34731 Query 118634 GGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGT-CTCTTCAT 118692 |||||| || |||| | || ||||| ||| | || |||| || || ||| | Sbjct 34732 GGTGACGGTCTGGGTGACCTGGTGGAGCTTCTCGAAGTCGAAAC-GCTCGTTCTCAATGT 34790 Query 118693 TGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAG 118752 ||| || | || ||||||| || || || || ||||| | | ||| || | ||| Sbjct 34791 CGACGTATGTGGGCAGGGCGAGAGATGCAAGGTTGCACACGGCGACCTCGTCAGGAGCAG 34850 Query 118753 TGTACTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGAT 118812 ||||||| ||||| || ||||| | || || || ||||| ||||||||||| || | Sbjct 34851 TGTACTCGATAATCTCGGTGCAGAGATTGGAGCTGCGGATGGTTCCCAAGTTCTTCTGGT 34910 Query 118813 TTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGG 118872 | ||| |||| || |||||||| || |||||||| || || ||||| ||||| | Sbjct 34911 TGCTCTTGCTGTTGGCAGCGTCCTTGTAGAGGATGTATGGGGTACCGGTCTCGGTTTGAG 34970 Query 118873 ACTTGAGAATAGCCTTCCAGA-CATCGGCAGCTGGCACAGTGGCGTTGGCTCGCCCCTCT 118931 || ||| || || | ||||| | || | ||| | || || | | ||||| Sbjct 34971 CCTCGAGGATGGCATACCAGAGCTTCTG-AGCGCGGACGGTCTCACGACCCTTGCCCTCA 35029 Query 118932 TCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGT 118991 |||||| ||| || | || ||||| | || | | || | || || || Sbjct 35030 CGCTCGTATCGCTCGTACAGCTCCTCGAACTCAGCGCCGTAGACATCAGCCAGACCGGGG 35089 Query 118992 GCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGG 119051 || | ||||| | | || ||| | | |||||| |||||||||||||| Sbjct 35090 CACTCGTGAGGGCACATCAAAGTCCAGGTGGTATTTTGCTCAACACGCTTCATGAAGAGA 35149 Query 119052 TCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTG 119111 ||||||| ||| || | |||| ||||| ||| ||| | || || | || || || Sbjct 35150 TCTGGGACCCACAGACCGTAGAACAGATCGCGAGCACGAACCTCCTCCTTTCCGTGGTTC 35209 Query 119112 AGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATT 119171 || | ||||| ||| | || ||| |||||||| || || | ||||| || | Sbjct 35210 TTGCGGAGATCCAAGAAGGAGAAGACATCTGCGTGCCATGGCTCGATGTACATGGCAAAA 35269 Query 119172 GACCCCTTACGACG------ACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACA 119225 | || | | || || |||||| || || | || ||| |||||| ||| Sbjct 35270 GCACC---AGGTCGCTTGTTGCCGCCCTGGTCGACGTAGCGAGCGGTGTTGTTAAACACA 35326 Query 119226 CGAAGCATTGGAATGATACCATCGGATTGGCCATTTGTCCCCCGAATACGAGACTTATTG 119285 || ||||| || | || ||| | |||| || || || || | || | | Sbjct 35327 CGCAGCATGGGTACGAGACCGTTGGATGTTCCGTTGGTGCCGCTGATGTATGCTCCGGTT 35386 Query 119286 GCTCTGACATC-GTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCA 119344 || | || || ||||| || | ||||| || || || ||| ||||| ||||| Sbjct 35387 GCGC-GAATTCTGTGGACGTTGAGCCCAATGCCTCCGGCGTTCTTGGAGATCATGGCGCA 35445 Query 119345 CTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCA 119404 | | | || ||||||||||||| || |||| | || | ||||||||||||| Sbjct 35446 GGTCTTTAATGTGTCGTAGATCCCATCAATGCTGTCATCTTTCATGTCGATGAGGAAGCA 35505 Query 119405 GCTCGACATTTGAGGCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAA 119464 | | || ||||| ||||||| |||||| |||| || || || | ||| || |||| Sbjct 35506 GGATGCCAGTTGAGCGTTGGGTGTTCCAGCGCTGAACAGCGTAGGCGACGCATGTGTGAA 35565 Query 119465 CATACCT-TGGGACATCTTGTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAA 119523 ||| | | ||||| | || ||||||||| | | ||| ||||| || ||||| | Sbjct 35566 -GTACTTGTTCGACATGTAGTTGTAGGTCTCAATGGCGGACTCGATGTCCTCGCCGTGGA 35624 Query 119524 TACCGATCGAGACCCGCATAAACATGTATTGGGGTGTTTCCATCAGGATACCATCGAGCC 119583 | |||| | || ||||| | ||| | ||| ||| | || | | || | || || Sbjct 35625 TGCCGACGGCCACACGCATGATCATCTGTTGTGGTCTCTCGGCAACCTTGCCGTTGATCC 35684 Query 119584 TCTGGAGGTAACTCTTCTCCAAGGTCTTGAGACCAAAATA 119623 || ||||| | |||||| ||||||| ||||| || Sbjct 35685 TCAAAAGGTATGACCTCTCCAGCGTCTTGAATCCAAAGTA 35724 >seq1700 Length=96718 Score = 170 bits (188), Expect = 2e-37 Identities = 539/818 (66%), Gaps = 27/818 (3%) Strand=Plus/Plus Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787 || || || || ||||||||||||||||| ||||| || | | | ||| |||||||| Sbjct 69184 TAATCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCTCCGAGGGAGATGTTCTCCATG 69243 Query 129788 AAATCAAATGGGTTCTTTGAGTTCCAAAT-TGCTGGCACTCCAAT--CTGTTTGAGGAGA 129844 || || || ||||| | | ||| | | |||| | | | | | ||||||| Sbjct 69244 AAGTCGAAGGGGTTGGTAGCGTTGTAGTGCTTCTGGTTGCCGAGTGCCAG---GAGGAGA 69300 Query 129845 CGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTTA 129904 || || | |||| |||| ||||| | |||| || || |||||| |||| ||| | Sbjct 69301 CGGTCGGCGACGAACTCGATGTATTGGCACATGAGCTTGGCGTTCATTCCGAGGAGCGCA 69360 Query 129905 CATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCG 129964 |||||||| ||||| || |||| ||| ||| ||| | ||||| || | |||| | Sbjct 69361 CATGGGAGGGCGTCTGTGAGGAACTCCTGCTCGATGACGACAGCCTCGGTGATGATGTCT 69420 Query 129965 TGAA-----TGGTCTCCGTGCCAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACGGCAA 130019 | || |||| | || | || | ||| | || ||| || ||||| Sbjct 69421 TCAACGACTTGGTTTGA-TGGCTTGT-TGTTGAGGTGAGA---GAACAGCAGGCAGGCAA 69475 Query 130020 ACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCA 130079 | || ||| | |||||||||||||||||||| || || |||||| || || |||| Sbjct 69476 AGTCGGTGTGCATGCCCTCGTCACGGGAGATGAGCTCGTTGGAGAAGGTGAGGCCGGGCA 69535 Query 130080 TGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCT 130139 ||||||| ||||||||||||||||| |||| || || || ||||||||||| |||| Sbjct 69536 TGAGACCACGCTTCTTCAACCAGAAGATCGATGCGAAAGATCCGGAGAAGAAGATACCCT 69595 Query 130140 CCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGTATCA-AACCAC 130198 | | || || || | |||||| ||||||| | | | |||| | | |||| Sbjct 69596 CAATGGCGGCAAAGGCGATGAGACGGCAGGCAAAGGTG-GAGTTCTTGTCGGAGATCCAC 69654 Query 130199 TTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGA-G 130257 || |||||| | ||||| || ||| || |||| | | | ||| || | |||| | Sbjct 69655 CGCAGCGCCCAGTCAGCCTTCTTACGGATGCATGGGATGTTGTCGATGGCGTTGAAGAGG 69714 Query 130258 TTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCC 130317 | | | | || || || || ||||||| | || ||||| || ||||| ||| Sbjct 69715 TACGTGCGTTGCT-TGGGCTCGCTGATGTATGTGTCGATGAGGAGGGAGTATGTCTCGGA 69773 Query 130318 ATGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTA 130376 |||| | | ||| || | ||| | ||||||| |||| || ||| || || | Sbjct 69774 GTGGATGTTCTCCATCAT-GATCTGGAAGCCGTAGAAGCAGCGGGCCTCGGGGATTTGCA 69832 Query 130377 CCTCATCTGCAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAA 130435 | || || || || | | ||| ||||| || || ||||| || |||| || Sbjct 69833 CTTC-TCCGCTGAAGCGCTCGATGAGGTTCTCGTTGACGATGCCATCCGAAGCAGCGAAG 69891 Query 130436 AACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTCG 130492 || ||||||| | ||||| | || | ||||| | | | ||||||||| Sbjct 69892 AAGGCCAGGACGTGGGAGATGAAGAAGCGCTCGTCGTCGTTGAGACGCTTGTTCCAGTCG 69951 Query 130493 TCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 130530 | ||||||||| |||||||| | |||||| || ||||| Sbjct 69952 TGAAGATCCTTGGAGAGATCGATCTCCTCGGCGGTCCA 69989 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618381898616200