Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zymoseptoria_20brevis_20[genbank_20GCA_5F000983655.1_202015-04-30] 6,895 sequences; 36,104,098 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq3840 205 1e-47 seq1700 113 5e-20 >seq3840 Length=90666 Score = 205 bits (226), Expect = 1e-47 Identities = 1133/1780 (64%), Gaps = 51/1780 (3%) Strand=Plus/Minus Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281 ||||| | ||| ||||||| |||||| |||| || || || || ||||| || || | | Sbjct 35658 CCACAACAGATGATCATGCGTGTGGCCGTCGGCATCCACGGCGAGGACATCGAGTCCGCC 35599 Query 104282 TTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTT 104340 | ||||| ||| || | ||||| | | ||| |||| || || | || || || || Sbjct 35598 ATTGAGACCTACAACTACATGTCGAACAAGTAC-TTCACACATGCGTCGCCTACGCTGTT 35540 Query 104341 CAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 104400 || ||||| ||||| | | ||| || | |||||||| |||| || || || || Sbjct 35539 CAGCGCTGGAACACCCAACGCTCAACTGGCATCCTGCTTCCTCATCGACATGAAAGATGA 35480 Query 104401 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAA--ATCTCAAAGTGGGCT 104458 | || | || ||||| | || ||| || ||||| | ||||| ||| || Sbjct 35479 CAGCATTGATGGGATCTACGACACA-TTAAAGACC-TGCGCCATGATCTCCAAGAACGCC 35422 Query 104459 GGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACA 104518 || || |||||| | || |||| | | || | | | || | || || Sbjct 35421 GGAGGCATTGGGCTCAACGTCCACAGAATTCGCGCAACCGGAGCATACATCAGCGGCACC 35362 Query 104519 AATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 104578 || || ||| | ||| | | || ||||| || || |||||| ||| || ||||| Sbjct 35361 AACGGAACATCCAACGGTCTCGTACCCATGCTGCGTGTGTTTAACAACACCGCTCGCTAC 35302 Query 104579 GTAAATCAAGCTGGGCGTCGA-AAGGGATCTA------TCGCAGTCTATCTTGAGCCATG 104631 || | || ||||| | | ||| || || | || | || | |||||||| Sbjct 35301 GTCGACCA----GGGCGGCAACAAGCGACCTGGTGCTTTTGCCATGTACATCGAGCCATG 35246 Query 104632 GCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCG 104691 |||||| ||| || | ||| | || | || ||||| || | ||||||| || Sbjct 35245 GCACGCAGATGTCTTCTCCTTCTTGGATCTCCGCAAGAACCACGGAAAGGAGGAGGTTCG 35186 Query 104692 GTGC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGG 104750 ||| |||||||| |||| || ||| ||| | |||||||||||||||||| | |||||| Sbjct 35185 -TGCTCGCGATCTGTTCTACGGTCTGTGGGTCCCAGATCTCTTCATGAAGCGTGTTGAGC 35127 Query 104751 AGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGG 104810 | | | || ||| || | | || || || || || ||||| | |||| | | Sbjct 35126 AAAATACCACCTGGACTTTGATGTGCCCTCACGAGTGCCCCGGTCTGGCTGATGTCTACG 35067 Query 104811 GTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACGG 104870 | | ||||| || | || ||| |||||| || || || || ||| | Sbjct 35066 GCGCTGAGTTCGAGGAGCTGTACGAGCGATACGAGCGTGAGGGCAAGGGTCGTGAGACCG 35007 Query 104871 TGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCA 104929 | | ||| | || | | ||| | || || ||| || ||||||||||||| ||||| ||| Sbjct 35006 TCCGCGCT-CAGAAGCTCTGGTATGCCATCCTCGAGGCTCAAACCGAGACCGGTACCCCA 34948 Query 104930 TACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATC 104989 ||||| || ||||| ||||| ||| ||||| || || ||||| ||||| ||| Sbjct 34947 TACATCCTCTACAAGGACGCTGCCAACAGCAAGAGCAACCAGAAGAACTTGGGAACCATC 34888 Query 104990 AAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTG 105049 || ||||||||||| || || || | || | || | || ||| || ||| Sbjct 34887 CGCAGCTCCAATCTCTGCACCGAGATTATCGAGTACACTGCTCCTGACGAGGTCGCCGTG 34828 Query 105050 TGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGA-CATTT-G 105107 || ||||| ||||| |||| || |||| || || || || || || || | ||| | Sbjct 34827 TGCAACCTTGCATCTCTCGCCCTGCCCACATACGTCGA--CATTGAGAACGAGCGTTTCG 34770 Query 105108 ATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTG 105167 | | || || |||||| | || || | || |||||||| ||| | |||| | || | Sbjct 34769 ACTTCGAGAAGCTCCACCAGGTCACCCAGACCGTCACCAAGAACTTGAACAAGATCATCG 34710 Query 105168 ATAGAAATTTTTACCCCGT-TGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATT 105226 | || |||||||| ||| ||||| || || | | |||||||| || Sbjct 34709 AGGTCAACCACTACCCCGTGCCAGA-AGCTCGCAAGAGCAACTTCCGTCACCGTCCCATC 34651 Query 105227 GGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCAT-TCTTTGTCGCCACGCATTTGATTC 105285 ||||| ||||| | ||||| || |||| ||| | || || ||| | ||||| || Sbjct 34650 GGTCTTGGTGTCAACGGTCTTGCTGATGCTTTCTTGGCTCTG-CGCATGCCTTTTGACTC 34592 Query 105286 CGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCT--- 105342 || || | |||| | || || |||||||| || ||||| ||||| Sbjct 34591 TCCTGAGGCTCGCCAGCTCAACATCCAGATCTTCGAGACCATCTACCACGCTGCTCTCAC 34532 Query 105343 ----TGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTT 105398 | | |||| || | || || || | ||| ||||| || || | ||||| | Sbjct 34531 CGCCTCATGCGATCTC---GCTGCCA-AGCT---TGGACCATACGAGACATACGAGGGGT 34479 Query 105399 CTCCAGCTTCACAAGGG-GTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCT--TC 105455 | || | || |||||| | ||| |||| || ||||||| |||| || | || || Sbjct 34478 CCCCCGTCTC-CAAGGGCGAGCTCCAATACGACATGTGGG-GTGTGACTCCTA-CTGATC 34422 Query 105456 ACTACGACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCC 105515 || ||||||| || ||||||| ||| ||| | ||| | || ||| |||| Sbjct 34421 TCTGGGACTGGGCCGCACTCAAGGCCAAGATCGCCGAGCATGGTGTCCGCAACTCGCTCC 34362 Query 105516 TCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTG 105575 || | ||||| |||||||| || |||||| | || ||| |||| || || || || | Sbjct 34361 TCGTCGCTCCCATGCCAACTGCGTCCACCTCGCAGATCATGGGCTTCAACGAGTGTTTCG 34302 Query 105576 AACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCA 105635 | || ||||| | |||||||| | | ||||| || ||||| | |||||| Sbjct 34301 AGCCATACACCAGCAACATCTACTCCCGTCGTGTGCTCGCTGGTGAGTTCCAGGTTGTCA 34242 Query 105636 ACAAGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGATC 105695 || | | || | ||| | ||| ||| |||||||| | | |||||| | | Sbjct 34241 ACCCGTGGTTGCTGAAGGACTTGGTCGAGCGTGGCCTCTGGTCAGACAACATGAAGAACC 34182 Query 105696 TCATGGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAAATGAAATTAAGA 105755 ||| | | ||||||||||| || ||| | || || |||| | ||| Sbjct 34181 GCATCATCGCCGATGGTGGTTCCATCCAGCGCATTCCAAACATCCCCGATGACCTCAAGG 34122 Query 105756 AGTTGTACCGCACAGTTTGGGAAATCAAGATGAAGGATGTCATTGACATGGCCGCAGATC 105815 ||||| || || ||||| |||| | | || || | ||| |||| || | Sbjct 34121 CTCTGTACAAGACCGTCTGGGAGATCAGCCAGCGCCACATCGTTCAGATGTCCGCTGACC 34062 Query 105816 GTGGTCGCTTCATTGATCAAAGTCAAAGTATGAATCTCTTCATGGAAAGTCCAACGATGT 105875 ||||| ||||| ||||| ||| || |||| || |||| | || || ||| Sbjct 34061 GTGGTGCTTTCATCGATCAGTCTCAGAGCCTGAACATCCACATGAAGGAGCCCACCATGG 34002 Query 105876 CCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGGATGTATT 105935 ||| || | |||||| | | | |||||| || || || || || ||||| | Sbjct 34001 GCAAAATCACCAGCATGCACTTCGCCGGCTGGAAGCTCGGCCTGAAGACTGGCATGTACT 33942 Query 105936 ACCTCCGATCTAAGGCAAAGGC-GCGCCCAATTCAGTTCA 105974 |||| || | | ||| | | |||||| |||||||||| Sbjct 33941 ACCTTCGCACCATGGCGGCGTCTGCGCCC-ATTCAGTTCA 33903 >seq1700 Length=96718 Score = 113 bits (124), Expect = 5e-20 Identities = 121/160 (76%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 94796 CCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCT 94855 ||||||| || ||| |||| ||||| ||||||||||||||||||| || || | Sbjct 69631 CCTTTGCCTGCCGTCTCATCGCCTTTGCCGCCATTGAGGGTATCTTCTTCTCCGGATCTT 69572 Query 94856 TCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACG 94915 || | || | ||| | |||||||| ||||||||||| || ||| ||||||||||| Sbjct 69571 TCGCATCGATCTTCTGGTTGAAGAAGCGTGGTCTCATGCCCGGCCTCACCTTCTCCAACG 69512 Query 94916 AGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 94955 |||| ||||| ||||||||||| | ||| || ||||| Sbjct 69511 AGCTCATCTCCCGTGACGAGGGCATGCACACCGACTTTGC 69472 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583210530209800