Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zymoseptoria_20brevis_20[genbank_20GCA_5F000983655.1_202015-04-30] 6,895 sequences; 36,104,098 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq5820 105 5e-18 >seq5820 Length=46620 Score = 105 bits (116), Expect = 5e-18 Identities = 164/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 30232 GTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTC 30291 |||||| ||||||||||||| ||| || || || ||||| || |||| ||||||||||| Sbjct 17876 GTACTCGGCTCCGAAATGCCGCCATTGAAAGCCATACACAGGACCCAAATCTCCCTCTTC 17817 Query 30292 CCTGTGCTCGAAGCCCCTC-TTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCT 30350 ||||| || ||| || | ||||||| | ||||| || || || |||||||||| | Sbjct 17816 TCTGTG-TCCAAGTCCTACGCTGTCCAAGTATTCTCTTGAGCCATTTCCGTCCCAGATAT 17758 Query 30351 TTACCCCCTTCTCAGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCT 30410 || || || ||| |||| ||| || || || || ||||||| ||||| Sbjct 17757 GCACGTTCTGGTCTTGTAGCAGCTTGGCGTTGGTTGAGCCGGCCACAAACCACAACAGCT 17698 Query 30411 CCTCCACGACGGCCTTCCAA--AAGACCCTCTTGGTCGTGAGGAGGGGAA 30458 | | | ||| || || | ||||| | |||||| |||||||| |||| Sbjct 17697 CGGCGAGGACAGC--TCGTAGGAAGACTCGCTTGGTGGTGAGGAGTGGAA 17650 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406276256594340