Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zymoseptoria_20brevis_20[genbank_20GCA_5F000983655.1_202015-04-30] 6,895 sequences; 36,104,098 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq1789 93.3 4e-14 >seq1789 Length=118145 Score = 93.3 bits (102), Expect = 4e-14 Identities = 151/212 (71%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 39075 CACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATC 39134 |||||| || || |||||||| || || || || ||||| | |||||| || |||| || Sbjct 19277 CACCAAGTGCAGGGTGCTCTCCTTCTGAATGTTGTAATCAGAAAGTGTCCGGCCGTCCTC 19336 Query 39135 AAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTC-GGTGGGCACGCTCTCTTTGTCCA 39193 |||||| ||||| || || || || ||||| || || |||||| | | ||| ||||| Sbjct 19337 AAGCTGCTTGCCGGCGAAGATGAGGCGCTGTTGATCCGGTGGG-ATACCCTCCTTGTCTT 19395 Query 39194 TGATTTTCTGTTTGAGCGTCGCC-ACCGTATCGCTCGACTCCACGTCCACCGTGATACTT 39252 || ||| || | ||| | | | || || |||||||| || | |||||| | Sbjct 19396 GAATCTTCGACTTCA-CGTTGTCGATTGTGTCTGATGACTCCACTTCGAGTGTGATAGTC 19454 Query 39253 TTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 || || || || || || || ||||||||||| Sbjct 19455 TTGCCGGTGAGTGTCTTGACGAAGATTTGCAT 19486 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429509504075135