Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zymoseptoria_20brevis_20[genbank_20GCA_5F000983655.1_202015-04-30] 6,895 sequences; 36,104,098 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq5820 91.5 1e-13 >seq5820 Length=46620 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/222 (71%), Gaps = 12/222 (5%) Strand=Plus/Minus Query 30015 CGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGA 30074 ||||||||| ||| || || || ||||| || |||| ||||||||||| ||||| || | Sbjct 17865 CGAAATGCCGCCATTGAAAGCCATACACAGGACCCAAATCTCCCTCTTCTCTGTG-TCCA 17807 Query 30075 AGCCCCTC-TTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCT-- 30131 || || | ||||||| | ||||| || || || |||||||||| | || || Sbjct 17806 AGTCCTACGCTGTCCAAGTATTCTCTTGAGCCATTTCCGTCCCAGATATGCACGTTCTGG 17747 Query 30132 TCTCGGAG-AGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACG 30190 ||| | || ||| |||| ||| || || || || ||||||| |||||| | | | Sbjct 17746 TCTTGTAGCAGC---TTGGCGTTGGTTGAGCCGGCCACAAACCACAACAGCTCGGCGAGG 17690 Query 30191 ACGGCCTTCCAA--AAGACCCTCTTGGTCGTGAGGAGGGGAA 30230 || || || | ||||| | |||||| |||||||| |||| Sbjct 17689 ACAGC--TCGTAGGAAGACTCGCTTGGTGGTGAGGAGTGGAA 17650 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406129068963970