Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zymoseptoria_20brevis_20[genbank_20GCA_5F000983655.1_202015-04-30] 6,895 sequences; 36,104,098 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq3840 156 6e-33 >seq3840 Length=90666 Score = 156 bits (172), Expect = 6e-33 Identities = 455/698 (65%), Gaps = 2/698 (0%) Strand=Plus/Plus Query 77925 TCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGAC 77984 || || ||| | || | |||||| ||| || ||||| || | ||||||||||| | | Sbjct 35054 TCGAACTCAGCGCCGTAGACATCAGCCAGACCGGGGCACTCGTGAGGGCACATCAAAGTC 35113 Query 77985 CAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAAT 78044 ||| || || || ||| || ||||| |||||||| || | ||| ||| | || Sbjct 35114 CAGGTGGTATTTTGCTCAACACGCTTCATGAAGAGATCTGGGACCCACAGACCGTAGAAC 35173 Query 78045 AGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATA 78104 ||||| || | | | || || ||||| ||||| ||||| | || | Sbjct 35174 AGATCGCGAGCACGAACCTCCTCCTTTCCGTGGTTCTTGCGGAGATCCAAGAAGGAGAAG 35233 Query 78105 ATATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCC 78164 | ||| | |||||||| || | || || || | | | |||||||| || || || ||| Sbjct 35234 ACATCTGCGTGCCATGGCTCGATGTACATGGCAAAAGCACCAGGTCGCTTGTTGCCGCCC 35293 Query 78165 TGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGAT 78224 || || | || | |||||||| ||| | || | || ||| || | | |||||| ||| Sbjct 35294 TGGTCGACGTAGCGAGCGGTGTTGTTAAACACACGCAGCATGGGTACGAGACCGTTGGAT 35353 Query 78225 GTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTAATGGATATCCCT 78284 ||||| || || || || || ||| |||||||||| | | | | ||| Sbjct 35354 GTTCCGTTGGTGCCGCTGATGTATGCTCCGGTTGCGCGAATTCTGTGGACGTTGAGCCCA 35413 Query 78285 ATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCT 78344 || ||||| || |||| || || | ||||| || ||||| |||||||| || || Sbjct 35414 ATGCCTCCGGCGTTCTTGGAGATCATGGCGCAGGTCTTTAATGTGTCGTAGATCCCATCA 35473 Query 78345 ATACTGTCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCT 78404 || |||||||| |||||| | || || ||| | || |||| | ||||| Sbjct 35474 ATGCTGTCATCTTTCATGTCGATGAGGAAGCAGGATGCCAGTTGAGCGTTGGGTGTTCCA 35533 Query 78405 GCATTAAATAATGTCGGAGATGCATGCGTAAACCA-TTTTTCAGAAAGTAGATTGTATGT 78463 || | || | || || || ||||| || || | || ||| | |||| ||||| || Sbjct 35534 GCGCTGAACAGCGTAGGCGACGCATGTGTGAAGTACTTGTTCGACATGTAG-TTGTAGGT 35592 Query 78464 TTCAATAGCTGATTCTATGTCCCATTGATGAATTCCTACCGCTACACGCATCAACATATG 78523 ||||| || || || |||||| || || || || || |||||||| | ||| || Sbjct 35593 CTCAATGGCGGACTCGATGTCCTCGCCGTGGATGCCGACGGCCACACGCATGATCATCTG 35652 Query 78524 CTGAGGTCTTTCAACCGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTT 78583 || ||||| || | ||| || || |||| | |||||| | |||| || || Sbjct 35653 TTGTGGTCTCTCGGCAACCTTGCCGTTGATCCTCAAAAGGTATGACCTCTCCAGCGTCTT 35712 Query 78584 AAAACCAAAATAGTTGTATGAAAAGTCTCTCTCGTAAA 78621 || ||||| || | ||| ||||| | ||||||| Sbjct 35713 GAATCCAAAGTATTGGTAGTTGAAGTCACGGTCGTAAA 35750 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694608928232800