Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zymoseptoria_20brevis_20[genbank_20GCA_5F000983655.1_202015-04-30] 6,895 sequences; 36,104,098 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq1447 149 2e-30 seq1789 138 3e-27 >seq1447 Length=163572 Score = 149 bits (164), Expect = 2e-30 Identities = 141/180 (78%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 177929 TTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCAT 177988 ||||||||| || ||||| || || || ||||||||||||||||| || |||||||| Sbjct 89222 TTTCGTGAAGACCCTCACGGGCAAGACTATCACCCTCGAGGTGGAGTCGTCCGACACCAT 89163 Query 177989 CGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACT 178048 ||| |||||||| ||||| ||||| || || |||||||| |||||||| || ||| | Sbjct 89162 CGACAACGTCAAGAGCAAGATCCAGGATAAGGAGGGAATCCCACCGGACCAACAGCGATT 89103 Query 178049 TATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAA 178108 |||||||||||||| || ||||| ||||| | ||| | ||| || ||| |||| || Sbjct 89102 GATCTTCGCCGGAAAGCAACTCGAGGATGGCCGAACTTTGAGCGACTACAACATCCAGAA 89043 >seq1789 Length=118145 Score = 138 bits (152), Expect = 3e-27 Identities = 154/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || |||||||| || || ||||||||| | |||||||| || ||| Sbjct 19711 CAGATCTTCGTCAAGACTCTCACTGGCAAGACGATCACCTTGGAGGTGGAGTCTTCGGAC 19652 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| |||||||| ||||| |||||||| || || || || || ||||| || Sbjct 19651 ACCATCGACAACGTCAAGTCTAAGATCCAGGACAAGGAGGGCATTCCCCCAGACCAACAG 19592 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||| | ||||||||||| || || ||||| || || | || || | || || ||| || Sbjct 19591 CGATTGATCTTCGCCGGCAAGCAACTCGAGGACGGCCGCACGCTCTCGGACTACAACATC 19532 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || ||||| || Sbjct 19531 CAGAAGGAGTCGACGCTCCATCTCGT 19506 Score = 132 bits (146), Expect = 1e-25 Identities = 142/188 (76%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| || || ||||| || || || ||||| ||||| ||||| |||||| Sbjct 19483 CAAATCTTCGTCAAGACACTCACCGGCAAGACTATCACACTCGAAGTGGAGTCATCAGAC 19424 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| ||||| || |||||||| ||||| || || ||||| ||||| || || Sbjct 19423 ACAATCGACAACGTGAAGTCGAAGATTCAAGACAAGGAGGGTATCCCACCGGATCAACAG 19364 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||||||||| || ||||| || || || |||| ||| | ||||| ||| | Sbjct 19363 CGCCTCATCTTCGCCGGCAAGCAGCTTGAGGACGGCCGGACACTTTCTGATTACAACATT 19304 Query 178104 CAAAAAGA 178111 || || || Sbjct 19303 CAGAAGGA 19296 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203624859752630