Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zymoseptoria_20pseudotritici_20[genbank_20GCA_5F000983605.1_202015- 04-30] 3,380 sequences; 36,798,086 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq3272 134 3e-26 >seq3272 Length=75414 Score = 134 bits (148), Expect = 3e-26 Identities = 313/467 (67%), Gaps = 4/467 (1%) Strand=Plus/Minus Query 230173 TTTGCCGAGCGTCTCGTCGCCTGGGTGTGTGTTGAAGGTATTCTGTTTTCCGGGAGTTTC 230232 |||||| |||||| |||||| | | ||||| || | || ||||| |||| Sbjct 16635 TTTGCCTGCCGTCTCATCGCCTTTGCCGCCATCGAAGGCATCTTCTTCTCCGGATCTTTC 16576 Query 230233 TGCGCC-ATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAACGA 230291 ||| | ||||| ||| || ||| ||| | |||||||||||| | | || ||||| Sbjct 16575 -GCGTCGATCTTCTGGTTGAAGAAGCGTGGTCTCATGCCTGGCCTCACTTTCTCCAACGA 16517 Query 230292 GTTCATCAGTCGCGACGAGGGTCTCCATCAAC-AGTTCGGCGAGCTTATGTATTCAAAGC 230350 | |||| || || ||||| | || || | | || | | || ||| || | | Sbjct 16516 GCTCATTTCCCGTGATGAGGGCATGCA-CACCGACTTTGCCTGCCTGCTGTTCTCTCATC 16458 Query 230351 TCCAGAACAAGCTACCATTCGAGACGGTCAAACAAATCATTACAGAAGCAGTTGAAAACG 230410 || | ||||||| | || | | ||| || | ||||| || || || || | | || Sbjct 16457 TCAACAACAAGCCATCAAACCAAGTGGTTGAAGACATCATCACCGAGGCTGTCGTCATCG 16398 Query 230411 AAAAGGAGTTCATTTGTGACGCTATTCCATGTCGCCTTATTGGCATGAACGCTGAACTTA 230470 | |||||||| | ||||| | |||||| || | || |||||||| | || | Sbjct 16397 AGCAGGAGTTCCTCACAGACGCCCTCCCATGTGCGCTCCTCGGAATGAACGCCAAGCTCA 16338 Query 230471 TGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAAAG 230530 || | || |||||||| ||||| ||||| || | | | ||||| || || |||| Sbjct 16337 TGTGCCAATACATCGAGTTCGTCGCCGATCGTCTCCTCCTGGCACTCGGCAACCAGAAGC 16278 Query 230531 TGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGACCA 230590 |||||| | | |||||||| | || |||||| ||| || || ||| ||||| | Sbjct 16277 ACTACAACGCCACCAACCCCTTCGATTTCATGGAGAACATCTCTCTCGGAGGCAAGACGA 16218 Query 230591 ACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGTGATG 230637 |||||||||| ||||||||| ||||||| || | | | ||||| ||| Sbjct 16217 ACTTCTTCGAGAAGCGTGTCGGTGACTACCAAAAGGCCGGTGTCATG 16171 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057778189609400