Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zymoseptoria_20pseudotritici_20[genbank_20GCA_5F000983605.1_202015-
04-30] 3,380 sequences; 36,798,086 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq3272 134 3e-26
>seq3272
Length=75414
Score = 134 bits (148), Expect = 3e-26
Identities = 313/467 (67%), Gaps = 4/467 (1%)
Strand=Plus/Minus
Query 230173 TTTGCCGAGCGTCTCGTCGCCTGGGTGTGTGTTGAAGGTATTCTGTTTTCCGGGAGTTTC 230232
|||||| |||||| |||||| | | ||||| || | || ||||| ||||
Sbjct 16635 TTTGCCTGCCGTCTCATCGCCTTTGCCGCCATCGAAGGCATCTTCTTCTCCGGATCTTTC 16576
Query 230233 TGCGCC-ATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAACGA 230291
||| | ||||| ||| || ||| ||| | |||||||||||| | | || |||||
Sbjct 16575 -GCGTCGATCTTCTGGTTGAAGAAGCGTGGTCTCATGCCTGGCCTCACTTTCTCCAACGA 16517
Query 230292 GTTCATCAGTCGCGACGAGGGTCTCCATCAAC-AGTTCGGCGAGCTTATGTATTCAAAGC 230350
| |||| || || ||||| | || || | | || | | || ||| || | |
Sbjct 16516 GCTCATTTCCCGTGATGAGGGCATGCA-CACCGACTTTGCCTGCCTGCTGTTCTCTCATC 16458
Query 230351 TCCAGAACAAGCTACCATTCGAGACGGTCAAACAAATCATTACAGAAGCAGTTGAAAACG 230410
|| | ||||||| | || | | ||| || | ||||| || || || || | | ||
Sbjct 16457 TCAACAACAAGCCATCAAACCAAGTGGTTGAAGACATCATCACCGAGGCTGTCGTCATCG 16398
Query 230411 AAAAGGAGTTCATTTGTGACGCTATTCCATGTCGCCTTATTGGCATGAACGCTGAACTTA 230470
| |||||||| | ||||| | |||||| || | || |||||||| | || |
Sbjct 16397 AGCAGGAGTTCCTCACAGACGCCCTCCCATGTGCGCTCCTCGGAATGAACGCCAAGCTCA 16338
Query 230471 TGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAAAG 230530
|| | || |||||||| ||||| ||||| || | | | ||||| || || ||||
Sbjct 16337 TGTGCCAATACATCGAGTTCGTCGCCGATCGTCTCCTCCTGGCACTCGGCAACCAGAAGC 16278
Query 230531 TGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGACCA 230590
|||||| | | |||||||| | || |||||| ||| || || ||| ||||| |
Sbjct 16277 ACTACAACGCCACCAACCCCTTCGATTTCATGGAGAACATCTCTCTCGGAGGCAAGACGA 16218
Query 230591 ACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGTGATG 230637
|||||||||| ||||||||| ||||||| || | | | ||||| |||
Sbjct 16217 ACTTCTTCGAGAAGCGTGTCGGTGACTACCAAAAGGCCGGTGTCATG 16171
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057778189609400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |