Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zymoseptoria_20pseudotritici_20[genbank_20GCA_5F000983605.1_202015-
04-30] 3,380 sequences; 36,798,086 total letters
Query= NC_002331.1
Length=178733
Score E
Sequences producing significant alignments: (Bits) Value
seq2317 132 6e-26
>seq2317
Length=245020
Score = 132 bits (146), Expect = 6e-26
Identities = 172/235 (73%), Gaps = 2/235 (1%)
Strand=Plus/Plus
Query 42950 CTATTGTCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTA 43009
||| |||||||| | | ||| | |||||| |||| ||||||||||| ||||| |||||
Sbjct 71195 CTACTGTCCTCCACGCAGACGGAGCACCAAGTGCAGGGTGCTCTCCTTCTGAATGTTGTA 71254
Query 43010 ATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTC 43069
|||| || || || |||| || |||||||| || ||||| ||||| ||||| |||||
Sbjct 71255 GTCAGAAAGCGTTCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATGAGGCGCTGTTGGTC 71314
Query 43070 GGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCG 43128
| || | | ||||||||| ||| || || | ||| | | | ||||| |
Sbjct 71315 CGGTGGGATACCCTCCTTGTCTTGGATCTTCGACTTCA-CGTTGTCGATTGTGTCTGATG 71373
Query 43129 ATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
| ||||| |||| ||||| || ||||| || || ||||| || |||||||||||
Sbjct 71374 ACTCCACTTCGAGTGTGATAGTCTTGCCGGTGAGTGTCTTGACGAAGATTTGCAT 71428
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 571793440706400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |