Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zymoseptoria_20pseudotritici_20[genbank_20GCA_5F000983605.1_202015- 04-30] 3,380 sequences; 36,798,086 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq3272 98.7 1e-15 >seq3272 Length=75414 Score = 98.7 bits (108), Expect = 1e-15 Identities = 113/152 (74%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 49951 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAA 50010 |||| || || || || ||| ||||| ||||| || | ||| || |||||||| Sbjct 16466 AACAGCAGGCAGGCAAAGTCGGTGTGCATGCCCTCATCACGGGAAATGAGCTCGTTGGAG 16525 Query 50011 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCA 50070 || ||||| || ||||| || |||||||| || | ||| || || ||||| || || || Sbjct 16526 AAAGTGAGGCCAGGCATGAGACCACGCTTCTTCAACCAGAAGATCGACGCGAAAGATCCG 16585 Query 50071 GAAAAGAAGATTCCTTCTACTGCGGCAAAGGC 50102 || |||||||| ||||| | ||||||||||| Sbjct 16586 GAGAAGAAGATGCCTTCGATGGCGGCAAAGGC 16617 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718238453143200