Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zymoseptoria_20pseudotritici_20[genbank_20GCA_5F000983605.1_202015- 04-30] 3,380 sequences; 36,798,086 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq709 104 4e-18 >seq709 Length=106414 Score = 104 bits (114), Expect = 4e-18 Identities = 84/99 (85%), Gaps = 2/99 (2%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||| |||| ||| | | || || |||||||| |||||||||||||| || || Sbjct 46915 GCGAAGCGTCACCGCAAGATTT-TGCGCGACAACATCCAGGGAATCACCAAGCCCGCAAT 46973 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTC 16530 ||| |||||||| ||||||||||| ||||||||| |||| Sbjct 46974 CCGCCGTCTGGCGCGTCGTGGTGGTGTCAAGCGTATCTC 47012 Score = 84.2 bits (92), Expect = 3e-12 Identities = 102/139 (73%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 16536 TGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATG 16595 || |||| || |||| || | ||| | |||| ||||||| || || |||| ||| | Sbjct 47081 TGATCTACGAGGAGACCCGCGGAGTTCTCAAGACCTTCCTCGAGGGTGTCATCCGTGACG 47140 Query 16596 CTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATG 16655 | || ||| ||||||||||| || || ||||| |||||||| | || ||||||| | Sbjct 47141 CCGTCACCTACACCGAGCACGCCAAGCGCAAGACCGTCACCTCTCTCGACGTCGTCTACG 47200 Query 16656 CATTGAAACGTCAAGGCCG 16674 | | || ||||||||||| Sbjct 47201 CCCTCAAGCGTCAAGGCCG 47219 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79072109642340