Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zymoseptoria_20pseudotritici_20[genbank_20GCA_5F000983605.1_202015- 04-30] 3,380 sequences; 36,798,086 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq2546 311 2e-79 >seq2546 Length=134672 Score = 311 bits (344), Expect = 2e-79 Identities = 1149/1782 (64%), Gaps = 26/1782 (1%) Strand=Plus/Minus Query 363391 TTCGGATATAAGACGATGGAGAAATCCTACCTATCTCGTATCAATGGTGATATTGTTGAA 363450 ||||| | |||||| |||||| || ||||| | | |||||||| | ||| ||| Sbjct 40357 TTCGGGTTCAAGACGCTGGAGAGGTCATACCTTTTGAGGATCAATGGCAAGGTTGCCGAA 40298 Query 363451 CGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGCC 363510 | || || || ||| | |||||||| ||| | || ||||| || ||| |||| | Sbjct 40297 AGACCACAACAGATGATCATGCGTGTGGCTGTGGGAATCCACGGCGAGGACATTGAGTCT 40238 Query 363511 GCGATTGAAACATATAAGCTTCTAAGT-GCTCGTGTA-TTCACGCACGCCACGCCAACAA 363568 || ||||| || || || || | | || | | ||| ||||| || || |||| || Sbjct 40237 GCCATTGAGACCTACAA-CTAC-ATGTCGAACAAGTACTTCACACATGCGTCGCCCACGC 40180 Query 363569 TGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGG 363628 ||| || ||||||||| | || | ||| || | || ||||| || | | ||||||| Sbjct 40179 TGTTCAGTGCTGGAACACCCAACGCTCAGCTGGCATCCTGCTTCCTCATCGACATGAAGG 40120 Query 363629 ACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAATG 363688 | || || || || |||| |||||||| |||| || || | || || ||||| | Sbjct 40119 ATGACAGTATTGATGGGATCTACGACACACTGAAGACCTGCGCCATGATCTCTAAGAACG 40060 Query 363689 CAGGCGGAATTGGTGT-ATCGATCCACAATGTTCGTGCA--CAGAACAGTTACATTCGCG 363745 | || || ||||| | | || |||||| |||| ||| | || || ||||| ||| Sbjct 40059 CCGGAGGCATTGGGCTCAACG-TCCACAGAATTCGCGCAACCGGAGCA--TACATCAGCG 40003 Query 363746 GCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGA 363805 |||| ||| || || || || || |||||||| ||||||||| |||| || || Sbjct 40002 GCACCAACGGAACATCCAACGGTCTCGTACCCATGCTGCGTGTGTTTAACAACACCGCTC 39943 Query 363806 GGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTC 363865 | |||||||||||||| || ||||| || || ||||| ||||| ||||||| Sbjct 39942 GCTACGTCGACCAGGGCGGCAATAAGCGACCTGGCGCCTTTGCCATGTACATCGAGCCAT 39883 Query 363866 ATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGC 363925 || || ||| | || || | || ||||| || ||| ||||| ||||| | | Sbjct 39882 GGCACGCAGATGTCTTCTCCTTCTTGGATCTCCGCAAGAACCACGGAAAGGAGGAGGTTC 39823 Query 363926 GTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGG 363985 |||| || ||||||||||| | || ||||| | || | || |||||||| || ||| Sbjct 39822 GTGCTCGCGATCTGTTCTACGGTCTGTGGGTCCCAGATCTCTTCATGAAGCGTGTTGAGC 39763 Query 363986 CAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATGGG 364045 | || | ||| | | | ||||| ||||| || || ||||| | ||||| | | Sbjct 39762 AAAATACCACCTGGACTTTGATGTGCCCTCACGAGTGCCCCGGTCTGGCTGATGTCTACG 39703 Query 364046 GTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAGACAA 364105 | | || | | | || ||||| || || ||||| |||| |||| |||| Sbjct 39702 GCGCTGAGTTCGAGGAGCTGTACGAGCGATACGAGCGTGAGGGCAAGGGTCGTGAGACCG 39643 Query 364106 TTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCT 364165 | | ||| |||||||| |||| ||||||| | || | || | ||||| || || || | Sbjct 39642 TCCGCGCTCAGAAGCTCTGGTATGCCATCCTCGAGGCTCAAACCGAGACCGGCACGCCAT 39583 Query 364166 ATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTC 364225 |||| | ||||| || | |||| ||||| ||||||| || | | || || | || Sbjct 39582 ATATCCTTTACAAGGACGCTGCCAACGGCAAGAGCAACCAGAAGAATTTGGGAACCA-TC 39524 Query 364226 AGCAG-AGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCGTA 364284 |||| |||||| || |||||||| || || ||||| ||||| || ||| ||||| Sbjct 39523 CGCAGCTCCAACCTCTGCACCGAGATCATCGAGTACACTGCTCCTGATGAGGTCGCCGTG 39464 Query 364285 TGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAAA-----AGATGGTAC-TTTTGAC 364338 || |||||||| || |||| ||||| | | ||| | ||| | | || ||| Sbjct 39463 TGCAACCTTGCATCTCTCGCTCTTCCCACCTATGTCGACATCGAGAACGAGCGCTTCGAC 39404 Query 364339 CACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATCTCGACAAGGTTATCGAC 364398 | | ||| | | || || | | || || | ||||| | ||||| Sbjct 39403 TTTGAAAAGCTTCACCAGGTCACACAGACCGTCACCAAGAACTTGAACAAGATCATCGAG 39344 Query 364399 AAGAATTATTATCCAATTCCTGAAGC-CGAGCGTTCTAATATGCGTCATCGCCCGATTGG 364457 || | || ||| | || || || || | | || | |||||||| || || || Sbjct 39343 GTCAACCACTACCCAGTGCCAGAGGCTCGCAAGAGC-AACTTCCGTCATCGTCCCATCGG 39285 Query 364458 TCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAAGATGGCATTTGATTCGCC 364517 ||| ||||| | || || || || | ||| || || ||| | || || || || Sbjct 39284 TCTCGGTGTCAATGGTCTTGCCGATGCTTTCTTGGCTCTTCGCATGCCTTTCGACTCTCC 39225 Query 364518 TGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATGACTGC 364577 ||| || ||| || || | ||||||| || || || || || || | || || Sbjct 39224 TGAGGCCCGTCAGCTCAACATTCAGATCTTCGAGACCATCTACCACGCTGCTCTCACCGC 39165 Query 364578 TTCGTGTGATTTGGCAAAAACCAAG---GGAAAGTACTCTACTTATGAGGGGTCCCCTCT 364634 ||| || ||| | || ||||| ||| ||| || || ||||| || || | Sbjct 39164 TTCATGCGATCTCGC---TGCCAAGCTTGGACCATACGAGACATACGAGGGCTCTCCCGT 39108 Query 364635 TTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGAACTG 364694 || |||| | | || | || | ||| ||| || || ||| | ||| |||| Sbjct 39107 CTCCAAGGGCGAGCTTCAATACGACATGTGGGGTGTGACTCCTACTGATCTCTGGGACTG 39048 Query 364695 GGATACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGCAACTCCCTCGTTACAGCGCC 364754 || | || |||| | |||||||| |||||||| || | || || Sbjct 39047 GGCCGCACTCAAGGCCAAGATCGCCGAGCATGGTGTCCGCAACTCGCTTCTCGTCGCTCC 38988 Query 364755 CATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCGTTTAC 364814 |||||| || ||||| || | |||||| | || ||||||||||||||| || | || Sbjct 38987 CATGCCAACTGCTTCCACCTCGCAGATCATGGGCTTCAACGAGTGCTTCGAGCCATACAC 38928 Query 364815 AAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAGTACCT 364874 ||||| | || || || || || || | || || || | || || || | | Sbjct 38927 CAGCAACATCTACTCCCGTCGTGTGCTCGCTGGTGAGTTCCAAGTTGTCAACCCATGGTT 38868 Query 364875 AGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATATCATCGC 364934 ||||||| | || || || |||||| |||| |||||||||| |||||||| Sbjct 38867 GCTCAAGGACTTGGTTGAGCGTGGCCTGTGGTCAGACAACATGAAGAACCGCATCATCGC 38808 Query 364935 CGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAAGCCTATTTACAA 364994 || | |||||| | ||| ||||| |||| || || || ||| || | || || Sbjct 38807 CGATGGTGGTTCCATCCAGCGAATTCCCAACATTCCCGACGACCTCAAGGCTCTGTATAA 38748 Query 364995 AACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCGATCGCGGTGCTTT 365054 ||||| ||||| || | ||| || | | ||| | || || || |||||||| Sbjct 38747 GACCGTCTGGGAGATCAGCCAGCGCCACATCGTCCAAATGTCCGCTGACCGTGGTGCTTT 38688 Query 365055 TATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCCAACCTCCGCCAAGCTTAC 365114 ||| |||| ||| | ||| | ||||| |||| ||| | |||| | || Sbjct 38687 CATCGATCAGTCTCAGAGCCTGAACATCCACATGAAGGAGCCCACCATGGGCAAGATCAC 38628 Query 365115 ATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156 |||||| ||| ||| ||||| ||| || ||||| || Sbjct 38627 CAGCATGCACTTCGCCGGCTGGAAGCTCGGCCTGAAGACTGG 38586 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303297156643160