Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zymoseptoria_20pseudotritici_20[genbank_20GCA_5F000983605.1_202015-
04-30] 3,380 sequences; 36,798,086 total letters
Query= NC_007383.1
Length=134394
Score E
Sequences producing significant alignments: (Bits) Value
seq864 86.0 5e-12
seq2317 84.2 2e-11
>seq864
Length=88037
Score = 86.0 bits (94), Expect = 5e-12
Identities = 110/152 (72%), Gaps = 0/152 (0%)
Strand=Plus/Minus
Query 24027 ATTACCATCGAAGTCGAGGCCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGAC 24086
|| ||| |||| || ||| | |||||||||||| | ||||| |||||| ||
Sbjct 47639 ATCACCCTCGAGGTGGAGTCGTCCGACACCATCGACAACGTCAAGAGCAAGATTCAGGAT 47580
Query 24087 AAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGAT 24146
|| || || || || || || |||||| || |||| | || ||| ||||||||||| |||
Sbjct 47579 AAGGAGGGAATCCCACCGGACCAACAGCGATTGATCTTCGCCGGAAAGCAACTCGAGGAT 47520
Query 24147 GACAGAAACGTCAGCGATTATAACATTCAAAA 24178
| | ||| ||||||| || ||||| || ||
Sbjct 47519 GGCCGAACTCTCAGCGACTACAACATCCAGAA 47488
>seq2317
Length=245020
Score = 84.2 bits (92), Expect = 2e-11
Identities = 141/204 (69%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
||||| | || || || || | ||||| || |||| ||| | || || ||| |
Sbjct 71656 ATGCAGATCTTCGTCAAGACCCTCACTGGCAAGACGATCACCTTGGAGGTGGAGTCGTCG 71597
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
||||||||||| | ||||| ||||| ||||| || ||||| || || || |||
Sbjct 71596 GACACCATCGACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGCATTCCCCCAGACCAA 71537
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170
||| || |||| | || |||||||||||| || || | | | | || ||| || |||
Sbjct 71536 CAGCGATTGATCTTCGCCGGCAAGCAACTTGAGGACGGCCGCACGCTCTCCGACTACAAC 71477
Query 24171 ATTCAAAAAGAATCTACAATTCAT 24194
||||| || || || || |||||
Sbjct 71476 ATTCAGAAGGAGTCCACGCTTCAT 71453
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429918289323900
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |