Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zymoseptoria_20pseudotritici_20[genbank_20GCA_5F000983605.1_202015- 04-30] 3,380 sequences; 36,798,086 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq2317 95.1 1e-14 >seq2317 Length=245020 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || || | ||| |||||||||||||| || ||||||||||||| | || | ||||| Sbjct 71445 AGGACGAGATGAAGCGTGGACTCCTTCTGAATGTTGTAGTCGGAGAGCGTGCGGCCGTCC 71504 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843 || | ||| ||||| || | || | ||||||||||| || | |||||| ||||| Sbjct 71505 TCAAGTTGCTTGCCGGCGAAGATCAATCGCTGTTGGTCTGGGGGAATGCCCTCCTTGTCC 71564 Query 16844 GCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTT 16903 || | | ||| || | | | | ||||| | |||| |||| |||||| || Sbjct 71565 TGGATCTTCGACTTGACATTGTCGATGGTGTCCGACGACTCCACCTCCAAGGTGATCGTC 71624 Query 16904 TTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || || || || || ||||| || |||||||| Sbjct 71625 TTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 71656 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||| || || | || |||| ||||| ||| |||||| || ||||||||||| | Sbjct 71202 CCTCCACGCAGACGGAGCACCAAGTGCAGGGTGCTCTCCTTCTGAATGTTGTAGTCAGAA 71261 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | ||||||| | || ||||| || | || || |||||||||||| || Sbjct 71262 AGCGTTCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATGAGGCGCTGTTGGTCCGGTGGG 71321 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | ||||| ||||| || | | |||||| | | | | ||||| | |||| | Sbjct 71322 ATACCCTCCTTGTCTTGGATCTTCGACTTCACGTTGTCGATTGTGTCTGATGACTCCACT 71381 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | ||||| || || ||||| || || ||||| || || ||||| Sbjct 71382 TCGAGTGTGATAGTCTTGCCGGTGAGTGTCTTGACGAAGATTTGCAT 71428 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405071312906200