Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zymoseptoria_20pseudotritici_20[genbank_20GCA_5F000983605.1_202015- 04-30] 3,380 sequences; 36,798,086 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq2317 105 6e-18 >seq2317 Length=245020 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || ||||| | ||||| || | |||||| ||||||||||||| || Sbjct 71428 ATGCAAATCTTCGTCAAGACACTCACCGGCAAGACTATCACACTCGAAGTGGAGTCATCA 71369 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| ||||| ||||| || ||| ||||| || || || ||||| |||||| Sbjct 71368 GACACAATCGACAACGTGAAGTCGAAGATCCAAGACAAGGAGGGTATCCCACCGGACCAA 71309 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | || || |||||||| || | || || | || || | || ||||| Sbjct 71308 CAGCGCCTCATCTTCGCCGGCAAGCAGCTTGAGGACGGCCGAACGCTTTCTGACTACAAC 71249 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGA 25226 ||||| || || ||| || || || ||||| | || | |||||| Sbjct 71248 ATTCAGAAGGAGAGCACCCTGCACTTGGTGCTCCGTCTGCGTGGAGGA 71201 Score = 105 bits (116), Expect = 6e-18 Identities = 153/214 (71%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| | || || || | ||||| | || ||||||||||| Sbjct 71656 ATGCAGATCTTCGTCAAGACCCTCACTGGCAAGACGATCACCTTGGAGGTGGAGTCGTCG 71597 Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 ||||| ||||| || || ||| || ||| ||||| || || ||||| || |||| Sbjct 71596 GACACCATCGA--CAATGTCAAGTCGAAGATCCAGGACAAGGAGGGCATTCCCCCAGACC 71539 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 ||||||| | || || |||||||| ||| | || || | ||||| | ||| |||| Sbjct 71538 AACAGCGATTGATCTTCGCCGGCAAGCAACTTGAGGACGGCCGCACGCTCTCCGACTACA 71479 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 | ||||| || || |||||||| ||| | || || Sbjct 71478 ACATTCAGAAGGAGTCCACGCTTCATCTCGTCCT 71445 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433310149594700