Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zymoseptoria_20pseudotritici_20[genbank_20GCA_5F000983605.1_202015-
04-30] 3,380 sequences; 36,798,086 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq3272 351 2e-91
seq2546 253 4e-62
>seq3272
Length=75414
Score = 351 bits (388), Expect = 2e-91
Identities = 596/852 (70%), Gaps = 14/852 (2%)
Strand=Plus/Minus
Query 42300 ATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTG 42359
|||||| |||||||||||||| || |||| ||||| ||||||||||| || ||
Sbjct 17031 ATCTGGCAAATGTACAAGAAGGCCGAGGCCTCCTTTTGGACTGCCGAGGAGATCGATCTC 16972
Query 42360 GCCAAGGACACGGCCGGCTGGGA---GTCACTGTCTGAGAACGAAAAGTTTTTCCTCAAA 42416
|||||||| || |||| | | ||| || |||| || ||| ||
Sbjct 16971 TCCAAGGACCTTCACGACTGGAACAAGCGCCTGAACGACGACGAGCGCTTCTTCATCTCC 16912
Query 42417 AACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGG 42476
|| | |||||||||||||| || || || ||||| ||||| |||||||| | |
Sbjct 16911 CACGTCCTGGCCTTCTTCGCTGCTTCGGATGGCATCGTCAACGAGAACCTCATCGAGCGC 16852
Query 42477 TTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATA 42536
|||| ||| ||||| | ||||| ||||||||||||||||||||||| ||
Sbjct 16851 TTCAGCGGAGAAGTGCAAATCCCCGAGGCCCGCTGCTTCTACGGCTTCCAGATCATGATG 16792
Query 42537 GAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGTC 42596
|||||| | ||||| ||| ||| || || || |||| |||||| || |||
Sbjct 16791 GAGAACATCCACTCCGAGACATACTCCCTCCTCATCGACACATACATCAGCGAGCCCAAG 16732
Query 42597 GAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGAC 42656
| || | || ||||| ||||| || | || || |||||| |||||||| |||
Sbjct 16731 CAACGCACGTACCTCTTCAACGCCATCGACAACATCCCATGCATCCGTAAGAAGGCTGAC 16672
Query 42657 TGGGCGCTCAACTGGATCGAGAGTCCCGA-CGCAACGTTCGGCGAGAGGCTGGTAGCCTT 42715
|||||||| |||||| | | || | | || || | | | || | |||||
Sbjct 16671 TGGGCGCTGCGATGGATCTCC-GACAAGAACTCCACCTTTGCCTGCCGTCTCATCGCCTT 16613
Query 42716 TACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCA 42775
| ||||| |||| |||||||||||||| || | ||||| || ||||||||| | ||| |
Sbjct 16612 TGCCGCCATCGAAGGCATCTTCTTCTCCGGATCTTTCGCGTCGATCTTCTGGTTGAAGAA 16553
Query 42776 GAA-GGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGC 42834
| ||| || ||||| || ||||| ||||| ||||| ||||| | | || |||||
Sbjct 16552 GCGTGGTCTC-ATGCCTGGCCTCACTTTCTCCAACGAGCTCATTTCCCGTGATGAGGGCA 16494
Query 42835 TGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCTCGAAGG 42894
|||| | |||||||||||||| |||||||| || |||| ||||||| || ||
Sbjct 16493 TGCACACCGACTTTGCCTGCCTGCTGTTCTC---TCATCTCAACAACAAGCCATCAAACC 16437
Query 42895 AGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGCAGT 42954
| ||| | ||||||||| ||||| || | |||||| ||||||||||||| |
Sbjct 16436 AAGTGGTTGAAGACATCATCACCGAGGCTGTCGTCATCGAGCAGGAGTTCCTCACAGACG 16377
Query 42955 CGCTGCCCGTGT-CCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCCAGTAC 43013
| || ||| ||| | || |||| |||||| | | ||||||||| | |||||| ||| |
Sbjct 16376 CCCT-CCCATGTGCGCTCCTCGGAATGAACGCCAAGCTCATGTGCCAATACATCGAGTTC 16318
Query 43014 GTCGCCGACCATCTCCT-GTGCCAGATGGGTCTCAGCCGCCTCTACAACACGCCGTGCCC 43072
|||||||| | |||||| || || || ||| | | ||||||| | | |||
Sbjct 16317 GTCGCCGATCGTCTCCTCCTGGCACTCGGCAACCAGAAG-CACTACAACGCCACCAACCC 16259
Query 43073 CTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAGCGCGT 43132
|||||| || |||||||||||||| | | |||||||| ||||| ||||||||||| ||
Sbjct 16258 CTTCGATTTCATGGAGAACATCTCTCTCGGAGGCAAGACGAACTTCTTCGAGAAGCGTGT 16199
Query 43133 CGCCGACTACCA 43144
|| ||||||||
Sbjct 16198 CGGTGACTACCA 16187
>seq2546
Length=134672
Score = 253 bits (280), Expect = 4e-62
Identities = 922/1426 (65%), Gaps = 59/1426 (4%)
Strand=Plus/Plus
Query 244090 GTTCACCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGG 244149
||| || || || ||||| || | ||||| || || ||||| ||||||| || ||
Sbjct 38876 GTTGACAACTTGGAACTCACCAGCGAGCACACGACGGGAGTAGATGTTGCTGGTGTATGG 38935
Query 244150 CTCGATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACAC 244209
||||| || ||| || ||||| ||||||| ||| ||||| |||||||| | ||
Sbjct 38936 CTCGAAGCACTCGTTGAAGCCCATGATCTGCGAGGTGGAAGCAGTTGGCATGGGAGCGAC 38995
Query 244210 CAGCAGACTGTTCCTCACGCCGTGCCTCTG-GATGCGGAGTCTGAGCTCGTTCCAGTCCC 244268
|| || ||| | || || ||| || | ||| | |||| || ||||||||
Sbjct 38996 GAGAAGCGAGTTGCGGACACCATGC-TCGGCGATCTTGGCCTTGAGTGCGGCCCAGTCCC 39054
Query 244269 ACATGCCCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGC 244328
| ||| || | | | ||||||||||| | || ||| ||||||
Sbjct 39055 A---------GAGATCAGTAGGAGTCACACCCCACATGTCGTATTGAAGCTCGCCCTTGG 39105
Query 244329 TGACGGGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGG--GCCAGCTTACAGCT 244386
|||||| ||||||||| ||| ||| || || || ||| || || | ||
Sbjct 39106 AGACGGGAGAGCCCTCGTATGTCTCGTATGGTCCAA-GCT-TGGCAGCGAGATCGCATGA 39163
Query 244387 CTCGTCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTT 244446
|| ||| || |||| ||||||||||||||||||| |||| | | |||||||
Sbjct 39164 AGCGGTGAGAGCAGCGTGGTAGATGGTCTCGAAGATCTGAATGTTGAGCTGACGGGCCT- 39222
Query 244447 GCCGCAG-GT-GAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCG 244504
| | || || ||| || |||| | || ||| | ||||| || || | || |||
Sbjct 39223 -CAGGAGAGTCGAAAGGCATGCGAAGAGCCAAGAAAGCATCGGCAAGACCATTGACACCG 39281
Query 244505 ATGCCGATGGGTCTGTGTCGCTTGTTGGAGCGCATG---GCTTCGGGCACGGGGTAAAAG 244561
| |||||||| | || || |||| | | || || || ||||| ||||| |
Sbjct 39282 AGACCGATGGGACGATGACGGAAGTTG---CTCTTGCGAGCCTCTGGCACTGGGTAGTGG 39338
Query 244562 TTGCCGTCGATCACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGC 244621
||| | ||||| | |||||| | ||| ||||| | | ||| | | |||
Sbjct 39339 TTGACCTCGATGATCTTGTTCAAGTTCTTGGTGACGGTCTGTGTGACCTGGTGAAGCTTT 39398
Query 244622 TGAAAGTCGTACTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCG 244681
| ||||||| | | | || | ||||| || || | | || |||
Sbjct 39399 TCAAAGTCGAA------GCGCTCGTTCTCGATGTCGA------CATAGGTGGGAAGAGCG 39446
Query 244682 ACGCTGGCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTG 244741
| || |||||||| ||||| ||||| || | ||||||| || |||||||||
Sbjct 39447 AGAGATGCAAGGTTGCACACGGCGACCTCATCAGGAGCAGTGTACTCGATGATCTCGGTG 39506
Query 244742 CAGAGGTTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCG 244801
|||||||| || |||||| |||| | || || ||| |||| ||||| |||
Sbjct 39507 CAGAGGTTGGAGCTGCGGATGGTTCCCAAATTCTTCTGGTTGCTCTTGCCGTTGGCAGCG 39566
Query 244802 TCCTTGTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAG 244861
|||||||| || || | ||| ||||||||| || || |||||| | | ||||
Sbjct 39567 TCCTTGTAAAGGATATATGGCGTGCCGGTCTCGGTTTGAGCCTCGAGGATGGCATACCAG 39626
Query 244862 AGGTCCCTAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGG 244921
|| | | ||| ||| ||| ||| |||||||||| |||||| || ||||||
Sbjct 39627 AGCTTCTGAGCGCGGACGGTCTCACGACCCTTGCCCTCACGCTCGTATCGCTCGTACAGC 39686
Query 244922 GCCTCGAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGA 244981
|||||||||| | ||| |||| || | || ||||||||| |||||||| | |
Sbjct 39687 TCCTCGAACTCAGCGCCGTAGACATCAGCCAGACCGGGGCACTCGTGAGGGCACATCAAA 39746
Query 244982 CTCCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGG 245041
|||| | | || || | || ||||||||| || |||| ||| || | | |
Sbjct 39747 GTCCAGGTGGTATTTTGCTCAACACGCTTCATGAAGAGATCTGGGACCCACAGACCGTAG 39806
Query 245042 AAGAGGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCA 245101
|| || || | | | ||| ||| || |||||| | || ||||| |||
Sbjct 39807 AACAGATCGCGAGCACGAACCTCCTCCTTTCCGTGGTTCTTGCGGAGATCCAAGAAGGAG 39866
Query 245102 AAGACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCT 245161
||||| || ||||||| ||||| ||||| | || | |||||| || ||||| |||||
Sbjct 39867 AAGACATCTGCGTGCCATGGCTCGATGTACATGGCAAAGGCGCCAGGTCGCTTATTGCCG 39926
Query 245162 CCCTGGTCCACCATCCTCTCGAGCG----CGTTGAAGATGCGCAGGGTAGGCACTATGCC 245217
|||||||| | | | |||||| ||| || | ||||| | || || | ||
Sbjct 39927 CCCTGGTCGA----CGTAGCGAGCGGTGTTGTTAAACACACGCAGCATGGGTACGAGACC 39982
Query 245218 GTTAGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCC-CTTGCCCCTGAGGTTGCTGATGG 245276
||| || ||||||||||| ||||||| || || |||| | | | ||| |||
Sbjct 39983 GTTGGATGTTCCGTTGGTGCCGCTGATGTATGCTCCGGTTGC----GCGAATTCTG-TGG 40037
Query 245277 ACAT---GCCTAGT-CCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCT 245332
|| | ||| | | || ||||||| ||| ||||| | ||||||| |||| | |||||
Sbjct 40038 ACGTTGAGCCCAATGCCTCCGGCGTTCTTAGAGATCATGGCGCAGGTCTTCAGTGTGTCG 40097
Query 245333 GCTATGCCCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGC 245392
|| || || || ||||| |||||||| || || |||||||| | |||||| |
Sbjct 40098 TAGATCCCATCAATACTGTCATCCTTCATGTCGATGAGGAAGCAGGATGCCAGCTGAGCG 40157
Query 245393 TTGGGGCTGCACGAGTTGAACAGAGTGGGGCTGGCGTGGGTAAAGTAGCGGCTCGAGAGG 245452
||||| | | | ||||||| ||||| || || || ||||| | |||| | |
Sbjct 40158 TTGGGTGTTCCAGCACTGAACAGCGTGGGCGACGCATGTGTGAAGTACTTGTTCGACATG 40217
Query 245453 AACCCGTACGTCTGGA--GCAGAGCGTCGATGTTGTCGCCGTGGAT 245496
| ||| |||| | ||||| || |||| |||||||||||
Sbjct 40218 TAGTTGTAGGTCTCAATGGCAGA--CTCAATGTCCTCGCCGTGGAT 40261
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944299301668800
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