Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zymoseptoria_20pseudotritici_20[genbank_20GCA_5F000983605.1_202015-
04-30] 3,380 sequences; 36,798,086 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
seq3272 127 5e-24
>seq3272
Length=75414
Score = 127 bits (140), Expect = 5e-24
Identities = 295/442 (67%), Gaps = 2/442 (0%)
Strand=Plus/Minus
Query 243298 CGTCTCGTCGCCTGGGTGTGCGTTGAAGGTATTCTGTTTTCCGGGAGTTTCTGCGCC-AT 243356
|||||| |||||| | | | ||||| || | || ||||| |||| ||| | ||
Sbjct 16626 CGTCTCATCGCCTTTGCCGCCATCGAAGGCATCTTCTTCTCCGGATCTTTC-GCGTCGAT 16568
Query 243357 CTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAACGAGTTCATCAG 243416
||| ||| || ||| ||| | |||||||||||| | | || |||||| ||||
Sbjct 16567 CTTCTGGTTGAAGAAGCGTGGTCTCATGCCTGGCCTCACTTTCTCCAACGAGCTCATTTC 16508
Query 243417 TCGCGACGAGGGCCTTCACCAACAGTTCGGTGAGCTTATGTATTCAAAGCTCCAGAACAA 243476
|| || |||||| | ||| | || | || ||| || | ||| | |||||
Sbjct 16507 CCGTGATGAGGGCATGCACACCGACTTTGCCTGCCTGCTGTTCTCTCATCTCAACAACAA 16448
Query 243477 GCTACCATTCGAAACGGTCAAACAAATCATCACAGAAGCAGTTGAAAACGAAAAGGAATT 243536
|| | || | || ||| || | |||||||| || || || | | ||| |||| ||
Sbjct 16447 GCCATCAAACCAAGTGGTTGAAGACATCATCACCGAGGCTGTCGTCATCGAGCAGGAGTT 16388
Query 243537 CATTTGCGACGCTATTCCATGCCGGCTTATTGGCATGAACTCTGAACTCATGGGACAGTA 243596
| | ||||| | ||||| ||| | || |||||| | | |||||| | || ||
Sbjct 16387 CCTCACAGACGCCCTCCCATGTGCGCTCCTCGGAATGAACGCCAAGCTCATGTGCCAATA 16328
Query 243597 CATCGAATTCGTAGCCGACCGCATTTTCATCGCGCTTGGTTATGAGAAAGTGTACAACTC 243656
|||||| ||||| ||||| || | || | || || || | |||| |||||| |
Sbjct 16327 CATCGAGTTCGTCGCCGATCGTCTCCTCCTGGCACTCGGCAACCAGAAGCACTACAACGC 16268
Query 243657 CAAGAACCCCTTTGCCTTTATGGAGCTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGA 243716
|| |||||||| | || |||||| ||| || || ||| || || |||||||||||
Sbjct 16267 CACCAACCCCTTCGATTTCATGGAGAACATCTCTCTCGGAGGCAAGACGAACTTCTTCGA 16208
Query 243717 AAAGCGTGTCAGTGATTATCAA 243738
||||||||| |||| || |||
Sbjct 16207 GAAGCGTGTCGGTGACTACCAA 16186
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1102832238403000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |