Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zymoseptoria_20pseudotritici_20[genbank_20GCA_5F000983605.1_202015- 04-30] 3,380 sequences; 36,798,086 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq2546 172 7e-38 seq3272 167 3e-36 >seq2546 Length=134672 Score = 172 bits (190), Expect = 7e-38 Identities = 949/1494 (64%), Gaps = 43/1494 (3%) Strand=Plus/Plus Query 113903 TTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGC 113962 |||||||| |||||||| ||||| || | ||||| ||| | ||||||||| Sbjct 38877 TTGACAACTTGGAACTCACCAGCGAGCACACGACGGGAGTAGATGTTGCTGGTGTATGGC 38936 Query 113963 TCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCATGGGTGCCATG 114022 || |||||||| ||| |||| ||| || | |||||| || || |||||||| || | | Sbjct 38937 TCGAAGCACTCGTTGAAGCCCATGATCTGCGAGGTGGAAGCAGTTGGCATGGGAGCGACG 38996 Query 114023 AGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAG 114082 ||||| ||| |||| ||| | || || ||||||| ||| ||||||| || Sbjct 38997 AGAAGCGAGTTGCGGACACCATGCTCGGCGATCTTGGCCTTGAGTGCGGCCCAGTCCCAG 39056 Query 114083 TTGAGCTTT----GTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGAGGCTGG 114138 || | | ||| | ||| ||||| || | || || || | |||| | || Sbjct 39057 A-GATCAGTAGGAGTCACACCC---CACATGTCGTATTGAAGCTCGCCCTTGGAGACGGG 39112 Query 114139 CGATCCCTCAAATGTCTCGTATGGGCCCTCAACCT---CCGCCAATTCGGAGCTCGCCTC 114195 || ||||| ||||||||||||| || || || | || | ||| | || Sbjct 39113 AGAGCCCTCGTATGTCTCGTATGGTCC---AAGCTTGGCAGCGAGATCGCATGAAGCGGT 39169 Query 114196 GAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCAT-TGCCTTGGCCTCGTCGG 114254 ||| || ||||| || || ||||| || || || || | || | |||||| | Sbjct 39170 GAGAGCAGCGTGGTAGATGGTCTCGAAGATCTGAATGTTGAGCTGACG-GGCCTCAGGAG 39228 Query 114255 AATCAAACGCGAGTCGGC-ACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCA 114313 | || || | | || | || ||| |||| || ||||| | ||||||||| || Sbjct 39229 AGTCGAAAGGCATGCGAAGAGCCAAGAAAG-CATCGGCAAGACCATTGACACCGAGACCG 39287 Query 114314 ATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTC-CACGGGATAAAAATTCCTATC 114372 || || ||||| | | || ||| ||||| ||| ||| || || || || Sbjct 39288 ATGGGACGATGACGGAAGTTGCTCTTGCGAGCC-TCTGGCACTGGGTAGTGGTTGACCTC 39346 Query 114373 GATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATC 114432 ||| | | | || | || |||||||| || ||||| | ||||||||||| | || Sbjct 39347 GATGATCTTGTTCAAGTTCTTGGTGACGGTCTGTGTGACCTGGTGAAGCTTTTCAAAGTC 39406 Query 114433 AAAACTGCGAGT-CTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACA 114491 || | || || ||| | |||||| | ||||| |||| || || || || |||| Sbjct 39407 GAAGC-GCTCGTTCTCGATGTCGACATAGGTGGGAAGAGCGAGAGATGCAAGGTTGCACA 39465 Query 114492 CAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAA 114551 | | | |||||| | |||||||||| || || || || || | || || || | Sbjct 39466 CGGCGACCTCATCAGGAGCAGTGTACTCGATGATCTCGGTGCAGAGGTTGGAGCTGCGGA 39525 Query 114552 TGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATG 114611 |||| ||||| ||||| || || ||| ||| || ||||||||||| || |||| Sbjct 39526 TGGTTCCCAAATTCTTCTGGTTGCTCTTGCCGTTGGCAGCGTCCTTGTAAAGGATATATG 39585 Query 114612 GCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGACATCGGCGGCTG-GCACA 114670 |||| || ||||| ||||| | || ||| || || | ||||| || ||| || | Sbjct 39586 GCGTGCCGGTCTCGGTTTGAGCCTCGAGGATGGCATACCAGA-----GCTTCTGAGCGC- 39639 Query 114671 GTGGCGTTGGCTCGCCCCT---CCTC---CTCGTACTTTGTGTAGAGGGCTTCAAACTCT 114724 | || | | || |||| |||| |||||| ||| || | || ||||| Sbjct 39640 -GGACGGTCTCACGACCCTTGCCCTCACGCTCGTATCGCTCGTACAGCTCCTCGAACTCA 39698 Query 114725 TCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCA 114784 | || | | || | || || || || | ||||| | | || ||| | Sbjct 39699 GCGCCGTAGACATCAGCCAGACCGGGGCACTCGTGAGGGCACATCAAAGTCCAGGTGGTA 39758 Query 114785 CCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGA 114844 | ||||||||||||||||||||| ||||||| ||| ||| | |||| ||||| ||| Sbjct 39759 TTTTGCTCAACACGCTTCATGAAGAGATCTGGGACCCACAGACCGTAGAACAGATCGCGA 39818 Query 114845 CAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCG 114904 ||| | || || | || || || || | ||||| ||| | || ||| ||| Sbjct 39819 GCACGAACCTCCTCCTTTCCGTGGTTCTTGCGGAGATCCAAGAAGGAGAAGACATCTGCG 39878 Query 114905 TGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACG---ACGACCAGCCTGGTTTACA 114961 ||||| || || | ||||| || | | || || | || |||||| || Sbjct 39879 TGCCATGGCTCGATGTACATGGCAAAGGCGCCAGGTCGCTTATTGCCGCCCTGGTCGACG 39938 Query 114962 TACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTT 115021 || | || ||| ||||| || || ||||| || | || ||| | ||| || || Sbjct 39939 TAGCGAGCGGTGTTGTTAAACACACGCAGCATGGGTACGAGACCGTTGGATGTTCCGTTG 39998 Query 115022 GTCCCCCGAATACGAGACTTATTGGCTCTGACATC-ATGGATGTGCATACCAATACCCCC 115080 || || | || | | || | || || |||| || | ||||| || || Sbjct 39999 GTGCCGCTGATGTATGCTCCGGTTGCGC-GAATTCTGTGGACGTTGAGCCCAATGCCTCC 40057 Query 115081 TGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCGTCGATCGAGTC 115140 || ||| ||||| ||||| | | || || |||||||||| || || ||| Sbjct 40058 GGCGTTCTTAGAGATCATGGCGCAGGTCTTCAGTGTGTCGTAGATCCCATCAATACTGTC 40117 Query 115141 ACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAA 115200 | |||| | |||| ||||||||| | || || | | ||||| ||||| |||| Sbjct 40118 ATCCTTCATGTCGATGAGGAAGCAGGATGCCAGCTGAGCGTTGGGTGTTCCAGCACTGAA 40177 Query 115201 GAGGGTTGGTGTCGCGTGGATGAACATACCT-TGGGACATCTTATCGTAGGTCTCCAAGA 115259 || || || | ||| || |||| ||| | | ||||| | | ||||||||| | | Sbjct 40178 CAGCGTGGGCGACGCATGTGTGAA-GTACTTGTTCGACATGTAGTTGTAGGTCTCAATGG 40236 Query 115260 CGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAACATGTATTGGGGTG 115319 | | |||||| || ||||| || || | | || ||||| | ||| | ||| ||| Sbjct 40237 CAGACTCAATGTCCTCGCCGTGGATTCCCACAGCCACACGCATGATCATCTGTTGTGGTC 40296 Query 115320 TTTCCATCAGGATACCATCGAGCCTCTGGAGGTAACTCTTCTCCAAGGTCTTGA 115373 |||| | | |||| || |||| ||||| | |||||| ||||||| Sbjct 40297 TTTCGGCAACCTTGCCATTGATCCTCAAAAGGTATGACCTCTCCAGCGTCTTGA 40350 >seq3272 Length=75414 Score = 167 bits (184), Expect = 3e-36 Identities = 546/828 (66%), Gaps = 43/828 (5%) Strand=Plus/Plus Query 125758 GTAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCT-GATATTCTCCA 125816 |||||| || || ||||||||||||||||| ||||| || ||| || ||| ||||||| Sbjct 16189 GTAGTCACCGACACGCTTCTCGAAGAAGTTCGTCTTGCC-TCCGAGAGAGATGTTCTCCA 16247 Query 125817 TAAAATCAAATGGGTTCTTTGAGTTCCAAATTGT-TGGCACCCCAAT--CTGTTTGAGGA 125873 | ||||| || ||||| | | ||| | | ||| || | | | | ||||| Sbjct 16248 TGAAATCGAAGGGGTTGGTGGCGTTGTAGTGCTTCTGGTTGCCGAGTGCCAG---GAGGA 16304 Query 125874 GACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGT 125933 ||||||| | |||| |||| ||||| | |||| || | |||||| |||| ||| Sbjct 16305 GACGATCGGCGACGAACTCGATGTATTGGCACATGAGCTTGGCGTTCATTCCGAGGAGCG 16364 Query 125934 TACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCACGATGG 125993 ||||||||| ||||| || |||| ||| ||| || | || || || | |||| Sbjct 16365 CACATGGGAGGGCGTCTGTGAGGAACTCCTGCTCGATGACGACAGCCTCGGTGATGATGT 16424 Query 125994 CGTGAATGGTGTCCACCCCAGGTCTATTGCGCAAAGTCTTGA----AGAGTTCCAC---- 126045 | | || |||| ||| | || || | |||| |||| | | Sbjct 16425 CTTCAA------CCACTT--GGTTTGATG-GCTTGTTGTTGAGATGAGAGAACAGCAGGC 16475 Query 126046 -GGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTC 126104 |||||| || ||| | ||||| |||||||| ||||| || || ||||| || | Sbjct 16476 AGGCAAAGTCGGTGTGCATGCCCTCATCACGGGAAATGAGCTCGTTGGAGAAAGTGAGGC 16535 Query 126105 CTGGCATGAGACCCCGCTTCTTCAACCAGAAAATCG-CACAAAATGAACCCGAGAAGAAG 126163 | ||||||||||| ||||||||||||||||| |||| | | ||| || || ||||||||| Sbjct 16536 CAGGCATGAGACCACGCTTCTTCAACCAGAAGATCGACGCGAAA-GATCCGGAGAAGAAG 16594 Query 126164 ATTCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTC- 126222 || || || | || || || | |||||| ||||||| | || || |||| Sbjct 16595 ATGCCTTCGATGGCGGCAAAGGCGATGAGACGGCAGGCAAAGGTG---GAGTTCTTGTCG 16651 Query 126223 --AAACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCT 126280 | ||| || |||||| | ||||| || ||| || |||| | | | ||| || Sbjct 16652 GAGATCCATCGCAGCGCCCAGTCAGCCTTCTTACGGATGCATGGGATGTTGTCGATGGCG 16711 Query 126281 TCAAAGA-GTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATA 126339 | |||| || | | | || || || || ||||||| | || ||||| || || Sbjct 16712 TTGAAGAGGTACGTGCGTTGCT-TGGGCTCGCTGATGTATGTGTCGATGAGGAGGGAGTA 16770 Query 126340 TGTTTCGCCGTGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGC 126398 ||| ||| ||||| | | ||| || | ||| | ||||||| |||| || ||| Sbjct 16771 TGTCTCGGAGTGGATGTTCTCCATCAT-GATCTGGAAGCCGTAGAAGCAGCGGGCCTCGG 16829 Query 126399 TTATCTGTACCTCATCGGCAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGAC 126457 || || || || || || || | | ||| ||||| || || ||||| || Sbjct 16830 GGATTTGCACTTC-TCCGCTGAAGCGCTCGATGAGGTTCTCGTTGACGATGCCATCCGAA 16888 Query 126458 CCAGCAAAAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCAGG---GTC 126514 |||| || || ||||||| | ||||| | || | ||||||||| | Sbjct 16889 GCAGCGAAGAAGGCCAGGACGTGGGAGATGAAGAAGCGCTCGTCGTCGTTCAGGCGCTTG 16948 Query 126515 TTCCAGTCGTCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCAA 126562 |||||||||| ||| ||||| |||||||| | |||||| ||||||||| Sbjct 16949 TTCCAGTCGTGAAGGTCCTTGGAGAGATCGATCTCCTCGGCAGTCCAA 16996 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597328361810400