Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zymoseptoria_20pseudotritici_20[genbank_20GCA_5F000983605.1_202015- 04-30] 3,380 sequences; 36,798,086 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq2317 96.9 3e-15 seq2215 82.4 8e-11 >seq2317 Length=245020 Score = 96.9 bits (106), Expect = 3e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 64253 TCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAA 64312 || || ||||||||||| || | | || || |||| ||||||||||||||||| | Sbjct 71238 TCCTTCTGAATGTTGTAGTCAGAAAGCGTTCGGCCGTCCTCAAGCTGCTTGCCGGCGAAG 71297 Query 64313 ATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACC 64372 ||||| ||||| ||||| || || || || || || ||||| || || ||| || Sbjct 71298 ATGAGGCGCTGTTGGTCCGGTGGGATACCCTCCTTGTCTTGGATCTTCGACTTCACGTTG 71357 Query 64373 TCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACG 64432 || | ||| || | |||||||| | || | ||||||||||| | || || ||| Sbjct 71358 TCGATTGTGTCTGATGACTCCACTTCGAGTGTGATAGTCTTGCCGGTGAGTGTCTTGACG 71417 Query 64433 AAAATTTGCAT 64443 || |||||||| Sbjct 71418 AAGATTTGCAT 71428 Score = 96.9 bits (106), Expect = 3e-15 Identities = 151/214 (71%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || ||||||| ||| || || || ||||||||||| || | || ||||| |||| Sbjct 71445 AGGACGAGATGAAGCGTGGACTCCTTCTGAATGTTGTAGTCGGAGAGCGTGCGGCCGTCC 71504 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 ||||| ||||||||||| | || | ||||| ||||| || ||||| || || || || Sbjct 71505 TCAAGTTGCTTGCCGGCGAAGATCAATCGCTGTTGGTCTGGGGGAATGCCCTCCTTGTCC 71564 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCG--TCCACTTCTACAGTTACGG 64409 || || || ||| ||| || | || | ||| || ||||| || | || | | Sbjct 71565 TGGATCTTCGACTTGACATTGTCGATGGTGT--CCGACGACTCCACCTCCAAGGTGATCG 71622 Query 64410 TCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||||||| || | || || ||||| || ||||| Sbjct 71623 TCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 71656 Score = 91.5 bits (100), Expect = 1e-13 Identities = 125/175 (71%), Gaps = 0/175 (0%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || || || || |||||||| || || ||||||| | || ||||| ||||||||| Sbjct 71688 GTGGACTCCTTCTGGATGTTGTAGTCGCTGAGGGTGCGCCCATCCTCAAGTTGCTTGCCG 71747 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 || | ||||| ||||||||||| |||||||| || || || || || || || ||| Sbjct 71748 GCGAAGATGAGGCGCTGCTGGTCTGGAGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTC 71807 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCA 64421 ||| || | ||||| || || || || | || | |||||| || |||| Sbjct 71808 ACATTGTCGATGGTATCCGAGGACTCAACCTCAAGGGTGATGGTCTTTCCAGTCA 71862 >seq2215 Length=151005 Score = 82.4 bits (90), Expect = 8e-11 Identities = 81/105 (77%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 ||||| || || || |||||||| || | || ||| || |||| || |||||||||||| Sbjct 66732 GTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCGTCCTCGAGCTGCTTGCCG 66791 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || | || || ||||| ||||| || ||||| ||||| || ||| Sbjct 66792 GCGAAGATCAGGCGCTGTTGGTCCGGTGGAATGCCTTCCTTGTCT 66836 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499623690007200