Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zymoseptoria_20pseudotritici_20[genbank_20GCA_5F000983605.1_202015- 04-30] 3,380 sequences; 36,798,086 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq2546 206 3e-48 >seq2546 Length=134672 Score = 206 bits (228), Expect = 3e-48 Identities = 1105/1733 (64%), Gaps = 43/1733 (2%) Strand=Plus/Plus Query 109509 CTGAGACTGATCGATGAATCGACCACGATCAGCCGCCATGTCGATGATACACTTTTGGCT 109568 |||||||||||||||||| |||||| ||||| | ||| | || ||| ||||| Sbjct 38672 CTGAGACTGATCGATGAAAGCACCACGGTCAGCGGACATTTGGACGATGTGGCGCTGGCT 38731 Query 109569 AATTTCCCAGACAGTCTTGTACAAATTCTTGATATCATCGGGAATGTCCACGATGTTTTG 109628 || |||||||| ||||| |||| | ||||| || |||||||||| || || Sbjct 38732 GATCTCCCAGACGGTCTTATACAGAGCCTTGAGGTCGTCGGGAATGTTGGGAATTCGCTG 38791 Query 109629 AATAGAGCCACCAGCCTTCACCATGAGATCCTTCATCTCTTTCGACCAGAGACCGACCTT 109688 || || |||||| | | ||| | | |||||| | | ||||| || || || Sbjct 38792 GATGGAACCACCATCGGCGATGATGCGGTTCTTCATGTTGTCTGACCACAGGCCACGCTC 38851 Query 109689 TTTGAGATCGTCAA-CAAG-ATGCTTGTTGACCACGACAAATTCACCAGCAAGTGTGCGT 109746 | || | | ||| ||| |||||| || || |||||||| || || Sbjct 38852 AACCAAGTCCTTGAGCAACCATGG--GTTGACAACTTGGAACTCACCAGCGAGCACACGA 38909 Query 109747 CGGAGGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTGCA 109806 ||| ||||||||| | ||||| || ||||| ||||| ||| ||| | ||| || | Sbjct 38910 CGGGAGTAGATGTTGCTGGTGTATGGCTCGAAGCACTCGTTGAAGCCCATGATCTGCGAG 38969 Query 109807 GTGGAAGCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGACCCT--TCGTCTTTA 109864 |||||||| || ||||||||||| | |||||| ||| |||| ||| | ||| | | Sbjct 38970 GTGGAAGCAGTTGGCATGGGAGCGACGAGAAGCGAGTTGCGGACACCATGCTCGGCGATC 39029 Query 109865 CCCGCTCACGCATTGCGTCCCAATCATAACGACCACTAAATTTAGTCTCACCATCCCACA 109924 || | | | |||| |||| || | || || || |||| |||| ||||| Sbjct 39030 TTGGC-CTTG-AGTGCGGCCCAGTCCCAGAGATCAGTAGG---AGTCACACC---CCACA 39081 Query 109925 TATCTGGTTGAAGTACACCCTCAGCAGCAGGAGAACCCTTGAAACTCTCGTACGACCCCT 109984 | || |||||| | |||| | | ||||| |||| | | ||||||| | || Sbjct 39082 TGTCGTATTGAAGCTCGCCCTTGGAGACGGGAGAGCCCTCGTATGTCTCGTATGGTCC-- 39139 Query 109985 CAACCTCGGCC---AACTCGGATGAAGCCTCTAGTGCCGCATGATACATAGTCTCAAAAA 110041 || || ||| | ||| ||||||| || || || || || || ||||| || | Sbjct 39140 -AAGCTTGGCAGCGAGATCGCATGAAGCGGTGAGAGCAGCGTGGTAGATGGTCTCGAAGA 39198 Query 110042 TATGAGCATTCATGAGGCGAGACTCTTCACAGTCGAAGGGAAGACCACAAAG--AATAAA 110099 | ||| || | | || | ||| | ||||||| || | | | | || || ||| Sbjct 39199 TCTGAATGTTGAGCTGACGGGCCTCAGGAGAGTCGAAAGGCATGCGA-AGAGCCAAGAAA 39257 Query 110100 CACATCCGCTAGACCCTGAACACCGAGACCAATGGGGCGATGCTTCATGTTAGAGCGT-C 110158 |||| || ||||| | ||||||||||| ||||| ||||| | ||| | | | | Sbjct 39258 G-CATCGGCAAGACCATTGACACCGAGACCGATGGGACGATGACGGAAGTT-GCTCTTGC 39315 Query 110159 GAGCAGTTTCTACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCGTCACAG 110218 |||| | || ||||| |||| ||||||| | || | ||||| || || | Sbjct 39316 GAGCCTCTGGCACTGGGTAGTGGTTGACCTCGATGATCTTGTTCAAGTTCTTGGTGACGG 39375 Query 110219 TCTTCGTGATTTCATGGAGTTTGTCGTAATCGAACGTTTTCG-TCTCCTTATTGACATAT 110277 ||| |||| | || || || || | ||||| | ||| |||| | | |||||| Sbjct 39376 TCTGTGTGACCTGGTGAAGCTTTTCAAAGTCGAA-GCGCTCGTTCTCGATGTCGACATAG 39434 Query 110278 TTGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCC 110337 |||| ||||| | ||| ||||| |||||||| | ||| || | ||||| || Sbjct 39435 GTGGGAAGAGCGAGAGATGCAAGGTTGCACACGGCGACCTCATCAGGAGCAGTGTACTCG 39494 Query 110338 AAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTG 110397 | || || || || | |||||| || ||| ||||| |||||||| || ||| Sbjct 39495 ATGATCTCGGTGCAGAGGTTGGAGCTGCGGATGGTTCCCAAATTCTTCTGGTTGCTCTTG 39554 Query 110398 GAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGA 110457 |||| || ||||| || || || ||||| || || || || || || | || ||| Sbjct 39555 CCGTTGGCAGCGTCCTTGTAAAGGATATATGGCGTGCCGGTCTCGGTTTGAGCCTCGAGG 39614 Query 110458 ATGGCCTTCCATA-CATCGGCGGCGGGGACAGTTGCGTTAGCGAGACCTTCCTCCTCGTA 110516 ||||| | ||| | | || | ||| |||| || | | | || || |||||| Sbjct 39615 ATGGCATACCAGAGCTTCTG-AGCGCGGACGGTCTCACGACCCTTGCCCTCACGCTCGTA 39673 Query 110517 CTTGGT-GTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTTGT 110575 | | | ||||| ||||| || || ||||| ||||||| ||||| || || Sbjct 39674 -TCGCTCGTACAGCTCCTCGAACTCAGCGCCGTAGACATCAGCCAGACCGGGGCACTCGT 39732 Query 110576 CGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAA 110635 || || | | | ||| | | | |||||| | ||||||||| || || || | Sbjct 39733 GAGGGCACATCAAAGTCCAGGTGGTATTTTGCTCAACACGCTTCATGAAGAGATCTGGGA 39792 Query 110636 TCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTA 110695 ||||| | |||| || || || |||| |||| || | || ||||| ||| | Sbjct 39793 CCCACAGACCGTAGAACAGATCGCGAGCACGAACCTCCTCCTTTCCGTGGTTCTTGCGGA 39852 Query 110696 GCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGATCCCT 110755 | ||||| ||| | || ||| | ||||||||| |||| || | || | || || Sbjct 39853 GATCCAAGAAGGAGAAGACATCTGCGTGCCATGGCTCGATGTACATGGCAAAGGCGCCAG 39912 Query 110756 TACG---ACGACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAG 110812 || | || |||||| || ||||| || ||| || || || | ||||| | Sbjct 39913 GTCGCTTATTGCCGCCCTGGTCGACGTAGCGAGCGGTGTTGTTAAACACACGCAGCATGG 39972 Query 110813 GAATAATTCCATCGGATTGACCATTTGTACCCCTAAT-TCTGGACTTATTGGCACGAATG 110871 | | | || | |||| || || || || || || | || | || || ||||| Sbjct 39973 GTACGAGACCGTTGGATGTTCCGTTGGTGCCGCTGATGTATGCTCCGGTT-GCGCGAATT 40031 Query 110872 TCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCACA-CTCTGTGAG 110930 ||||| | | ||||| || || || |||| || || || ||| | || Sbjct 40032 CTGTGGACGTTGAGCCCAATGCCTCCGGCGTTCTTAGAGATCATGGCGCAGGTCT-TCAG 40090 Query 110931 TGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACAT 110990 ||| | || || |||||||| || |||| || | || || ||||| || | || Sbjct 40091 TGTGTCGTAGATCCCATCAATACTGTCATCCTTCATGTCGATGAGGAAGCAGGATGCCAG 40150 Query 110991 CTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAGACCTTG 111050 ||||| || ||||| ||| |||| || || || | |||||| ||| || |||| Sbjct 40151 CTGAGCGTTGGGTGTTCCAGCACTGAACAGCGTGGGCGACGCATGTGTGA--AGTACTTG 40208 Query 111051 --GGACATCTTGTTGTATGTGTCGAGTGCGGAGGGTACATCTTTACCGTGAATACCAATG 111108 ||||| | |||||| || || | || || | || | ||||| || || | Sbjct 40209 TTCGACATGTAGTTGTAGGTCTCAATGGCAGACTCAATGTCCTCGCCGTGGATTCCCACA 40268 Query 111109 GCAACTCGCATGAACATATATTGAGGCGTTTCGATTAGCTTTCCATCAACACGCTGAAGG 111168 || || ||||||| ||| | ||| || ||||| | ||| |||| | | | |||| Sbjct 40269 GCCACACGCATGATCATCTGTTGTGGTCTTTCGGCAACCTTGCCATTGATCCTCAAAAGG 40328 Query 111169 TAACTCTTCTCTAGGGTCTTGAGACCAAAGTATCCAAAATCGAAATCACGATC 111221 || | |||| || ||||||| || |||||| | | ||||||||| || Sbjct 40329 TATGACCTCTCCAGCGTCTTGAACCCGAAGTATTGGTAGTTGAAATCACGGTC 40381 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588951115764000