Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zymoseptoria_20pseudotritici_20[genbank_20GCA_5F000983605.1_202015-
04-30] 3,380 sequences; 36,798,086 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq2546 206 3e-48
>seq2546
Length=134672
Score = 206 bits (228), Expect = 3e-48
Identities = 1105/1733 (64%), Gaps = 43/1733 (2%)
Strand=Plus/Plus
Query 109509 CTGAGACTGATCGATGAATCGACCACGATCAGCCGCCATGTCGATGATACACTTTTGGCT 109568
|||||||||||||||||| |||||| ||||| | ||| | || ||| |||||
Sbjct 38672 CTGAGACTGATCGATGAAAGCACCACGGTCAGCGGACATTTGGACGATGTGGCGCTGGCT 38731
Query 109569 AATTTCCCAGACAGTCTTGTACAAATTCTTGATATCATCGGGAATGTCCACGATGTTTTG 109628
|| |||||||| ||||| |||| | ||||| || |||||||||| || ||
Sbjct 38732 GATCTCCCAGACGGTCTTATACAGAGCCTTGAGGTCGTCGGGAATGTTGGGAATTCGCTG 38791
Query 109629 AATAGAGCCACCAGCCTTCACCATGAGATCCTTCATCTCTTTCGACCAGAGACCGACCTT 109688
|| || |||||| | | ||| | | |||||| | | ||||| || || ||
Sbjct 38792 GATGGAACCACCATCGGCGATGATGCGGTTCTTCATGTTGTCTGACCACAGGCCACGCTC 38851
Query 109689 TTTGAGATCGTCAA-CAAG-ATGCTTGTTGACCACGACAAATTCACCAGCAAGTGTGCGT 109746
| || | | ||| ||| |||||| || || |||||||| || ||
Sbjct 38852 AACCAAGTCCTTGAGCAACCATGG--GTTGACAACTTGGAACTCACCAGCGAGCACACGA 38909
Query 109747 CGGAGGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTGCA 109806
||| ||||||||| | ||||| || ||||| ||||| ||| ||| | ||| || |
Sbjct 38910 CGGGAGTAGATGTTGCTGGTGTATGGCTCGAAGCACTCGTTGAAGCCCATGATCTGCGAG 38969
Query 109807 GTGGAAGCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGACCCT--TCGTCTTTA 109864
|||||||| || ||||||||||| | |||||| ||| |||| ||| | ||| | |
Sbjct 38970 GTGGAAGCAGTTGGCATGGGAGCGACGAGAAGCGAGTTGCGGACACCATGCTCGGCGATC 39029
Query 109865 CCCGCTCACGCATTGCGTCCCAATCATAACGACCACTAAATTTAGTCTCACCATCCCACA 109924
|| | | | |||| |||| || | || || || |||| |||| |||||
Sbjct 39030 TTGGC-CTTG-AGTGCGGCCCAGTCCCAGAGATCAGTAGG---AGTCACACC---CCACA 39081
Query 109925 TATCTGGTTGAAGTACACCCTCAGCAGCAGGAGAACCCTTGAAACTCTCGTACGACCCCT 109984
| || |||||| | |||| | | ||||| |||| | | ||||||| | ||
Sbjct 39082 TGTCGTATTGAAGCTCGCCCTTGGAGACGGGAGAGCCCTCGTATGTCTCGTATGGTCC-- 39139
Query 109985 CAACCTCGGCC---AACTCGGATGAAGCCTCTAGTGCCGCATGATACATAGTCTCAAAAA 110041
|| || ||| | ||| ||||||| || || || || || || ||||| || |
Sbjct 39140 -AAGCTTGGCAGCGAGATCGCATGAAGCGGTGAGAGCAGCGTGGTAGATGGTCTCGAAGA 39198
Query 110042 TATGAGCATTCATGAGGCGAGACTCTTCACAGTCGAAGGGAAGACCACAAAG--AATAAA 110099
| ||| || | | || | ||| | ||||||| || | | | | || || |||
Sbjct 39199 TCTGAATGTTGAGCTGACGGGCCTCAGGAGAGTCGAAAGGCATGCGA-AGAGCCAAGAAA 39257
Query 110100 CACATCCGCTAGACCCTGAACACCGAGACCAATGGGGCGATGCTTCATGTTAGAGCGT-C 110158
|||| || ||||| | ||||||||||| ||||| ||||| | ||| | | | |
Sbjct 39258 G-CATCGGCAAGACCATTGACACCGAGACCGATGGGACGATGACGGAAGTT-GCTCTTGC 39315
Query 110159 GAGCAGTTTCTACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCGTCACAG 110218
|||| | || ||||| |||| ||||||| | || | ||||| || || |
Sbjct 39316 GAGCCTCTGGCACTGGGTAGTGGTTGACCTCGATGATCTTGTTCAAGTTCTTGGTGACGG 39375
Query 110219 TCTTCGTGATTTCATGGAGTTTGTCGTAATCGAACGTTTTCG-TCTCCTTATTGACATAT 110277
||| |||| | || || || || | ||||| | ||| |||| | | ||||||
Sbjct 39376 TCTGTGTGACCTGGTGAAGCTTTTCAAAGTCGAA-GCGCTCGTTCTCGATGTCGACATAG 39434
Query 110278 TTGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCC 110337
|||| ||||| | ||| ||||| |||||||| | ||| || | ||||| ||
Sbjct 39435 GTGGGAAGAGCGAGAGATGCAAGGTTGCACACGGCGACCTCATCAGGAGCAGTGTACTCG 39494
Query 110338 AAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTG 110397
| || || || || | |||||| || ||| ||||| |||||||| || |||
Sbjct 39495 ATGATCTCGGTGCAGAGGTTGGAGCTGCGGATGGTTCCCAAATTCTTCTGGTTGCTCTTG 39554
Query 110398 GAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGA 110457
|||| || ||||| || || || ||||| || || || || || || | || |||
Sbjct 39555 CCGTTGGCAGCGTCCTTGTAAAGGATATATGGCGTGCCGGTCTCGGTTTGAGCCTCGAGG 39614
Query 110458 ATGGCCTTCCATA-CATCGGCGGCGGGGACAGTTGCGTTAGCGAGACCTTCCTCCTCGTA 110516
||||| | ||| | | || | ||| |||| || | | | || || ||||||
Sbjct 39615 ATGGCATACCAGAGCTTCTG-AGCGCGGACGGTCTCACGACCCTTGCCCTCACGCTCGTA 39673
Query 110517 CTTGGT-GTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTTGT 110575
| | | ||||| ||||| || || ||||| ||||||| ||||| || ||
Sbjct 39674 -TCGCTCGTACAGCTCCTCGAACTCAGCGCCGTAGACATCAGCCAGACCGGGGCACTCGT 39732
Query 110576 CGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAA 110635
|| || | | | ||| | | | |||||| | ||||||||| || || || |
Sbjct 39733 GAGGGCACATCAAAGTCCAGGTGGTATTTTGCTCAACACGCTTCATGAAGAGATCTGGGA 39792
Query 110636 TCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTA 110695
||||| | |||| || || || |||| |||| || | || ||||| ||| |
Sbjct 39793 CCCACAGACCGTAGAACAGATCGCGAGCACGAACCTCCTCCTTTCCGTGGTTCTTGCGGA 39852
Query 110696 GCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGATCCCT 110755
| ||||| ||| | || ||| | ||||||||| |||| || | || | || ||
Sbjct 39853 GATCCAAGAAGGAGAAGACATCTGCGTGCCATGGCTCGATGTACATGGCAAAGGCGCCAG 39912
Query 110756 TACG---ACGACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAG 110812
|| | || |||||| || ||||| || ||| || || || | ||||| |
Sbjct 39913 GTCGCTTATTGCCGCCCTGGTCGACGTAGCGAGCGGTGTTGTTAAACACACGCAGCATGG 39972
Query 110813 GAATAATTCCATCGGATTGACCATTTGTACCCCTAAT-TCTGGACTTATTGGCACGAATG 110871
| | | || | |||| || || || || || || | || | || || |||||
Sbjct 39973 GTACGAGACCGTTGGATGTTCCGTTGGTGCCGCTGATGTATGCTCCGGTT-GCGCGAATT 40031
Query 110872 TCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCACA-CTCTGTGAG 110930
||||| | | ||||| || || || |||| || || || ||| | ||
Sbjct 40032 CTGTGGACGTTGAGCCCAATGCCTCCGGCGTTCTTAGAGATCATGGCGCAGGTCT-TCAG 40090
Query 110931 TGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACAT 110990
||| | || || |||||||| || |||| || | || || ||||| || | ||
Sbjct 40091 TGTGTCGTAGATCCCATCAATACTGTCATCCTTCATGTCGATGAGGAAGCAGGATGCCAG 40150
Query 110991 CTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAGACCTTG 111050
||||| || ||||| ||| |||| || || || | |||||| ||| || ||||
Sbjct 40151 CTGAGCGTTGGGTGTTCCAGCACTGAACAGCGTGGGCGACGCATGTGTGA--AGTACTTG 40208
Query 111051 --GGACATCTTGTTGTATGTGTCGAGTGCGGAGGGTACATCTTTACCGTGAATACCAATG 111108
||||| | |||||| || || | || || | || | ||||| || || |
Sbjct 40209 TTCGACATGTAGTTGTAGGTCTCAATGGCAGACTCAATGTCCTCGCCGTGGATTCCCACA 40268
Query 111109 GCAACTCGCATGAACATATATTGAGGCGTTTCGATTAGCTTTCCATCAACACGCTGAAGG 111168
|| || ||||||| ||| | ||| || ||||| | ||| |||| | | | ||||
Sbjct 40269 GCCACACGCATGATCATCTGTTGTGGTCTTTCGGCAACCTTGCCATTGATCCTCAAAAGG 40328
Query 111169 TAACTCTTCTCTAGGGTCTTGAGACCAAAGTATCCAAAATCGAAATCACGATC 111221
|| | |||| || ||||||| || |||||| | | ||||||||| ||
Sbjct 40329 TATGACCTCTCCAGCGTCTTGAACCCGAAGTATTGGTAGTTGAAATCACGGTC 40381
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588951115764000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |